PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu029954.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 472aa    MW: 52782.5 Da    PI: 6.2934
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu029954.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS449.91.7e-1371014711374
         GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98 
                  l+++L++cA+ +s++dl +aq+l+++l++l+s +g+p+qRl ay++e+L ar+a+s+s++yk+l+++e +   s e l+++++++ev+P++kf+++ a
  Oeu029954.1 101 LKKVLIACAKTISNNDLLMAQWLISELRQLVSVSGEPIQRLGAYMLEGLVARMASSGSTIYKSLRCKEPA---SFELLSYMHILYEVCPYFKFGYMSA 195
                  5789*****************************************************************9...9************************ PP

         GRAS  99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeL 194
                  N aI ea++ e+rvHiiDf+i qG QW++L+qa+a+Rp+gpp++RiTg+++++s   +   l  +g++L+k+A++++vpfef+  +a +  +++le+L
  Oeu029954.1 196 NGAIAEAMKDENRVHIIDFQIRQGSQWITLIQAFAARPGGPPHIRITGIDDSTSAyaRGGGLCIVGQKLSKLAQTFKVPFEFHS-AAMSGCEIQLENL 292
                  ***************************************************998899999************************.899999******* PP

         GRAS 195 rvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgr 292
                   ++pgEalaVn++++l +++desvs+e++rd +L+lvksl+Pkvv++veqe+++n++ F+ rfleal+yy+a+f+s++a+lpr+ +eri++E+++l+r
  Oeu029954.1 293 GIRPGEALAVNFAFMLNHMPDESVSTENHRDGLLRLVKSLNPKVVTLVEQESNTNTAAFFPRFLEALDYYTAMFESIDATLPRDRKERISIEQHCLAR 390
                  ************************************************************************************************** PP

         GRAS 293 eivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                  ++vn++aceg er erhe l+kW++r+++aGF+p+pls+ +++++++ll+++ ++ yr+ee++g+l+lgW +r L++ +aW+
  Oeu029954.1 391 DVVNIIACEGMERGERHELLGKWKSRFKMAGFSPYPLSSLVNATIRMLLQNYCNK-YRLEERDGALYLGWLNRDLIASCAWK 471
                  *****************************************************66.*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 472 aa     Download sequence    
MSINCTLYNS PSIVNFSPDD SPMSKPHISP DTNYGSPTSG SCITEDVNDF RHKLKELETV  60
MLGPDLDILE TYNNTLSSNT IASPDIDSWR QMMEAIHIGD LKKVLIACAK TISNNDLLMA  120
QWLISELRQL VSVSGEPIQR LGAYMLEGLV ARMASSGSTI YKSLRCKEPA SFELLSYMHI  180
LYEVCPYFKF GYMSANGAIA EAMKDENRVH IIDFQIRQGS QWITLIQAFA ARPGGPPHIR  240
ITGIDDSTSA YARGGGLCIV GQKLSKLAQT FKVPFEFHSA AMSGCEIQLE NLGIRPGEAL  300
AVNFAFMLNH MPDESVSTEN HRDGLLRLVK SLNPKVVTLV EQESNTNTAA FFPRFLEALD  360
YYTAMFESID ATLPRDRKER ISIEQHCLAR DVVNIIACEG MERGERHELL GKWKSRFKMA  420
GFSPYPLSSL VNATIRMLLQ NYCNKYRLEE RDGALYLGWL NRDLIASCAW K*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.10.0GRAS family protein