PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu029913.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB_related

Protein Properties

Length: 800aa MW: 89002 Da PI: 6.5038

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu029913.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	21.4	5.7e-07	236	264	3	32
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg 32 WT++E+ + ++a+++lG++ W+ Ia+++ Oeu029913.1 236 IWTEDEERQSIQAHERLGNR-WAEIAKYFS 264 6*****************.****975 PP

Sequence ? help Back to Top
Protein Sequence Length: 800 aa Download sequence
MARMRPEHGL DTVPRNCPKM PENQATLRPC HVLDMACTPC PRNCLEMPGN QAASQPRPRR 60 VLDKACRPLP RNCLEIHENQ AASLLYAGHS LHIVSQKLPR NAKKSGCVPN MACTQCLLGQ 120 DASRTWPAHN AQKLSKNSKK SCCVPDKAMT CPKYVLHIVS QKLPRMLGNV PGPRHRLHNN 180 FSSNGTTSNY TTGEPSFMEG LQHEKQTSDE EMVGGVGKQC REKWNNHLHP RIKKDIWTED 240 EERQSIQAHE RLGNRWAEIA KYFSNSSTST NSNFGTTTTA ANPSNVGTRL FDNEDSTPFF 300 SFESCNDEMG FMKTLFENNQ SIDSIPVDHC QLMNLVEGTF ENTYSFNIDE NYNHPTIFFT 360 SRENLRTTDS QLPAIEYVEN DLFHSIPNPM GNKFFPSENS DLIIEFNSNF RSVETEASQI 420 YPDELYFSYQ WDGCNAGNIT STTNLPTIDQ VYYSSSSSPY SCCASPYSAP ITRTNKEKDK 480 VTFVEPKKQW VQVLAVPSVL PTTTTAVVIK SVSAPVVPTS TPITVDPEAP LYIHSIAEPT 540 PNAPIEVSTS PIITSIAPIP TATTDVPPEL THISSPPLKT HTDGTQSTQG SGTGTVPQTT 600 LAQGLLAEIS SERHGVKRML IDHFKKDYGM KVGSTMRFAI EDLVFKLFGE GPSMSKTPTH 660 TPSPNPSIIA PTQNKVKEHI QRDIDGMGLG DCVRNAEDDV PIVSSSHDSD VVAQSTMRLD 720 TPVTSTMRSD ALSFHPTFSA PPSEQYFSPK YASSRRRDPT PTSEPNNADY YDPKMFETIC 780 MTRSMPMYYH PMIYPWEYP*

Sequence ? help Back to Top

Protein Sequence Length: 800 aa Download sequence

MARMRPEHGL DTVPRNCPKM PENQATLRPC HVLDMACTPC PRNCLEMPGN QAASQPRPRR  60
VLDKACRPLP RNCLEIHENQ AASLLYAGHS LHIVSQKLPR NAKKSGCVPN MACTQCLLGQ  120
DASRTWPAHN AQKLSKNSKK SCCVPDKAMT CPKYVLHIVS QKLPRMLGNV PGPRHRLHNN  180
FSSNGTTSNY TTGEPSFMEG LQHEKQTSDE EMVGGVGKQC REKWNNHLHP RIKKDIWTED  240
EERQSIQAHE RLGNRWAEIA KYFSNSSTST NSNFGTTTTA ANPSNVGTRL FDNEDSTPFF  300
SFESCNDEMG FMKTLFENNQ SIDSIPVDHC QLMNLVEGTF ENTYSFNIDE NYNHPTIFFT  360
SRENLRTTDS QLPAIEYVEN DLFHSIPNPM GNKFFPSENS DLIIEFNSNF RSVETEASQI  420
YPDELYFSYQ WDGCNAGNIT STTNLPTIDQ VYYSSSSSPY SCCASPYSAP ITRTNKEKDK  480
VTFVEPKKQW VQVLAVPSVL PTTTTAVVIK SVSAPVVPTS TPITVDPEAP LYIHSIAEPT  540
PNAPIEVSTS PIITSIAPIP TATTDVPPEL THISSPPLKT HTDGTQSTQG SGTGTVPQTT  600
LAQGLLAEIS SERHGVKRML IDHFKKDYGM KVGSTMRFAI EDLVFKLFGE GPSMSKTPTH  660
TPSPNPSIIA PTQNKVKEHI QRDIDGMGLG DCVRNAEDDV PIVSSSHDSD VVAQSTMRLD  720
TPVTSTMRSD ALSFHPTFSA PPSEQYFSPK YASSRRRDPT PTSEPNNADY YDPKMFETIC  780
MTRSMPMYYH PMIYPWEYP*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G11050.1	2e-17	MYB family protein