PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu029906.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | ERF | ||||||||
Protein Properties | Length: 244aa MW: 26734.2 Da PI: 9.2633 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65.8 | 8.4e-21 | 105 | 154 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr ++ +grW AeIrd + g r r++lg+f+taeeAa+a++aa++kl+g Oeu029906.1 105 SYRGVRKRP-WGRWSAEIRDrV---G-RCRHWLGTFDTAEEAARAYDAAARKLRG 154 69*******.**********55...2.59************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence |
MNPNFPMLNS CPFFPKHQPG ETFSLLHQWP VAPFSPISDP KLVVPEIHNP ISDDFVNERE 60 QNPHVLEGIA AIVGEHVLFG GGNINSTIKN EGDERNVDGV GVQKSYRGVR KRPWGRWSAE 120 IRDRVGRCRH WLGTFDTAEE AARAYDAAAR KLRGSKARTN FEIPPVLPIS SSNSSSSEVK 180 NGRKGKKSQD ERRKCSVVTS AAHLFSLNPV ADNVSAGVNL ELDLKLGGSV SESRVPSMMV 240 NLI* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G80580.1 | 6e-29 | ERF family protein |