PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu029617.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

Trihelix

Protein Properties

Length: 352aa MW: 38868.9 Da PI: 5.5591

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu029617.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	49	1.6e-15	120	204	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 Wt++e+ L++a ++ + +r++l+ W+evskk+ +e ++er+ +qC+++++ l+k+ykk+k ++ + +s+s+++yf++++ Oeu029617.1 120 WTESETVILLDAWGDRFLKHGRKSLRSEEWQEVSKKVsQESKIERTDTQCRNRLDTLKKKYKKEKMKLGE-SWGSTSKWVYFKKMD 204 ***********************************88999***********************9.588999******8 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MGGAVCDGGV LWAWWFGGVM GIVVTGDCGA HEAMVVLAVV VSNYCCVVVD VGGGCGCGGS 60 DKWAVCNQQL AVGVYFSESL NLKASQDDNY EFAPRVPAPS SATPAVPKPS YGGRNPHTDW 120 TESETVILLD AWGDRFLKHG RKSLRSEEWQ EVSKKVSQES KIERTDTQCR NRLDTLKKKY 180 KKEKMKLGES WGSTSKWVYF KKMDMLLSSG PQQAGLSCGV DSGEYTFMNP KVYLNSSNGM 240 DEMRDSPGNS ESTKGEEGVP EGLPPKKTRN EMGNGASLKL LADSIQKFSD IYEKIENSKR 300 QQMLELEKMR MDFHRDLEMQ KRQILERAQA EIVKIRQGDE DNDVSAENVS G*

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MGGAVCDGGV LWAWWFGGVM GIVVTGDCGA HEAMVVLAVV VSNYCCVVVD VGGGCGCGGS  60
DKWAVCNQQL AVGVYFSESL NLKASQDDNY EFAPRVPAPS SATPAVPKPS YGGRNPHTDW  120
TESETVILLD AWGDRFLKHG RKSLRSEEWQ EVSKKVSQES KIERTDTQCR NRLDTLKKKY  180
KKEKMKLGES WGSTSKWVYF KKMDMLLSSG PQQAGLSCGV DSGEYTFMNP KVYLNSSNGM  240
DEMRDSPGNS ESTKGEEGVP EGLPPKKTRN EMGNGASLKL LADSIQKFSD IYEKIENSKR  300
QQMLELEKMR MDFHRDLEMQ KRQILERAQA EIVKIRQGDE DNDVSAENVS G*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24490.1	5e-72	Trihelix family protein