PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu029546.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | NF-YB | ||||||||
Protein Properties | Length: 186aa MW: 20027.5 Da PI: 6.9464 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 175.4 | 5.7e-55 | 31 | 125 | 1 | 95 |
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 vreqdrflPian+srimkk+lPan+ki+k+aketvqecvsefisf+tseasdkc+rekrktingddllwa+ lGfedy++plkvyl++yre ++ Oeu029546.1 31 VREQDRFLPIANISRIMKKALPANGKIAKEAKETVQECVSEFISFITSEASDKCKREKRKTINGDDLLWAMVILGFEDYIDPLKVYLARYREGDT 125 69*****************************************************************************************9765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 186 aa Download sequence |
MADAGMQGVL PGSPDGGSHE SGGDLSPRSN VREQDRFLPI ANISRIMKKA LPANGKIAKE 60 AKETVQECVS EFISFITSEA SDKCKREKRK TINGDDLLWA MVILGFEDYI DPLKVYLARY 120 REGDTKASAK GADGSSRNES VQPSTSSQLA HQGSFSQAIN YGNSQVPTLH VSVHDSKFPL 180 PMLLG* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37060.1 | 2e-77 | NF-YB family protein |