PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu029370.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | ERF | ||||||||
Protein Properties | Length: 166aa MW: 18756.5 Da PI: 8.9249 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 25.6 | 3.1e-08 | 3 | 45 | 11 | 56 |
AP2 11 krgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 + g++vAeIr p + r ++lg++ a +Aa a++ +++++g+ Oeu029370.1 3 RCGKYVAEIRNPAT---RSVVWLGTYYNAVDAAMAYDSTARRIHGA 45 579********954...4*************************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 166 aa Download sequence |
MRRCGKYVAE IRNPATRSVV WLGTYYNAVD AAMAYDSTAR RIHGAKARTN FPLKDGRNMQ 60 SFVHNGVELS PLDLTLAPPR NFPIECYHRQ RQFCAVHSLS QPRRHATPTA EAPLGLCLSQ 120 RSMLEIIQTY EELLQMKAVQ AQRDVLDLDL NRPPPWDEVL TPPLS* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G44210.1 | 2e-19 | ERF family protein |