PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Oeu029093.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 245aa MW: 27108.1 Da PI: 6.1773 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.1 | 7.9e-17 | 51 | 101 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr + +g+Wv+eIr+p++ + r++lg+f +e+Aa+a++ a+ +++g Oeu029093.1 51 PVYRGVRMRA-WGKWVSEIREPRK---KSRIWLGTFANPEMAARAHDVAAVAIKG 101 68*****998.**********843...6*********************998876 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 245 aa Download sequence |
MAESSSHSIS SSNKHTCTKK SQPNKRRRDE EIINGEKRNK TGNDNANSKH PVYRGVRMRA 60 WGKWVSEIRE PRKKSRIWLG TFANPEMAAR AHDVAAVAIK GKNAILNFPE ISHLLPRPDT 120 CSPRDVQAAA NKAAHMDHLP EMASLLPSMA SSSSSTSLVS SLTVTSSSVQ SEDVSTESGE 180 AQEELSEIVE LPSLEASYDD IVVVNRAADF VFAEDVGWDY NHPWLHEDCG FFGDNHMIEN 240 TIFW* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G11590.1 | 3e-46 | ERF family protein |