PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu028507.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | ERF | ||||||||
Protein Properties | Length: 224aa MW: 24610.2 Da PI: 9.8197 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 68.4 | 1.3e-21 | 27 | 78 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 ++y+GVr ++ +g+W+AeIrdp+ + +r++lg+f+tae+Aa+a+++a+++++g+ Oeu028507.1 27 KKYRGVRMRP-WGKWAAEIRDPY----KaRRVWLGTFDTAEDAARAYDKAALRFRGN 78 59********.**********76....35*************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence |
MIQTSAVYAY IPTYDNNIES HEGIPRKKYR GVRMRPWGKW AAEIRDPYKA RRVWLGTFDT 60 AEDAARAYDK AALRFRGNKA KLNFPENVRL VPASSSSSSS SSSSRSSILF PRNTFFPVST 120 SSEPIVHTQA QSIINPNTHE FMNLDDSQGQ PTSLLGQLLF QSSTCSTFQS SSSSLYDRAF 180 FPSTTSSPLL FSAQPRDNLI AANSRNSEAD FSLGGSSHQT SSG* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G50080.1 | 2e-27 | ERF family protein |