PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu028342.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

NF-X1

Protein Properties

Length: 892aa MW: 99975.3 Da PI: 8.3359

Description

NF-X1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu028342.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-NF-X1	24.8	4.6e-08	231	250	1	20
zf-NF-X1 1 CGkHkCqklCHeGpCppCpq 20 CG H+C+++CHeG+CppC++ Oeu028342.1 231 CGVHRCGEICHEGDCPPCRE 250 ******************85 PP
2	zf-NF-X1	17.8	7.5e-06	420	437	3	20
zf-NF-X1 3 kHkCqklCHeGpCppCpq 20 +HkC ++CH+G C pCp+ Oeu028342.1 420 NHKCPAPCHRGACAPCPL 437 7***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 892 aa Download sequence
MVATLPLPQS PPLSSDSDND SPTRDHHHVD HSSSIFQSYL SHSSTVSTSQ HDLIKIQSFL 60 ISSRSGALSC LICLERIKPT DPTWSCTSRC FALFHLLCIQ SWAHQSTTLA TLRATSRAAI 120 PDENSIVWPC PKCRVEYLKS QTPKNYYCFC GKLEDPPRDP WILPHSCGEI CGQALRNNCG 180 HFCLLLCHPG ACPSCPKLVK TKCFCGKLED VKRCGFKNFS CNGVCRKFLE CGVHRCGEIC 240 HEGDCPPCRE KGVYRCQCGR VKMERQCCER HFRCENACDK ILGCGKHGCE RGCHEGECGE 300 CPFQGKRTCP CGNRIYEGMA CDVTVPLCGA TCNKMLSCGF HRCPERCHHG PCIETCRIVV 360 MKSCRCGSLK KQVPCYQDLT CERKCQKMRD CGRHACKRRC CNGECPPCSE ICDRKLRCRN 420 HKCPAPCHRG ACAPCPLMVS ISCSCGTTHF EGAIGELQAK GKGEKRRKEG EIEEEGNVPC 480 GTEAEQKPPK CPKPCRIPRL CRHASSGKPH KCHYGACPPC RLICDEEYPC RHKCKLRCHG 540 PIPPPIPEFT LKPKKKKSNY QTELTPGVPC PPCSELVLRS CVGHHIGAER MIVCSNRAEF 600 SCENLCGNPL PCGNHYCTYV CHALAHHISK SDGISRGESC EKCTLPCEKE RHPTCPHPCP 660 LPCHQGECPP CKALIKRSCH CGAMVHVFEC KYFNSMSKEE QIAVRSCRGP CHRKLPNCKH 720 LCPETCHPGP CPSPDKCFKK VTVRCGCQTL KREWLCEDVQ SAYLQAGCDP KDISRNQYGF 780 GLLPCDSDCK SKVKVSDAEL QLRKSKLVEE KEPDTENNVT KRRRRRQRVQ EDKNISTLQK 840 IVSAIRRILL LLIIAVIITT LAYFGYKGLM WLSDWMNEVE THQRRRRYPA I*

Sequence ? help Back to Top

Protein Sequence Length: 892 aa Download sequence

MVATLPLPQS PPLSSDSDND SPTRDHHHVD HSSSIFQSYL SHSSTVSTSQ HDLIKIQSFL  60
ISSRSGALSC LICLERIKPT DPTWSCTSRC FALFHLLCIQ SWAHQSTTLA TLRATSRAAI  120
PDENSIVWPC PKCRVEYLKS QTPKNYYCFC GKLEDPPRDP WILPHSCGEI CGQALRNNCG  180
HFCLLLCHPG ACPSCPKLVK TKCFCGKLED VKRCGFKNFS CNGVCRKFLE CGVHRCGEIC  240
HEGDCPPCRE KGVYRCQCGR VKMERQCCER HFRCENACDK ILGCGKHGCE RGCHEGECGE  300
CPFQGKRTCP CGNRIYEGMA CDVTVPLCGA TCNKMLSCGF HRCPERCHHG PCIETCRIVV  360
MKSCRCGSLK KQVPCYQDLT CERKCQKMRD CGRHACKRRC CNGECPPCSE ICDRKLRCRN  420
HKCPAPCHRG ACAPCPLMVS ISCSCGTTHF EGAIGELQAK GKGEKRRKEG EIEEEGNVPC  480
GTEAEQKPPK CPKPCRIPRL CRHASSGKPH KCHYGACPPC RLICDEEYPC RHKCKLRCHG  540
PIPPPIPEFT LKPKKKKSNY QTELTPGVPC PPCSELVLRS CVGHHIGAER MIVCSNRAEF  600
SCENLCGNPL PCGNHYCTYV CHALAHHISK SDGISRGESC EKCTLPCEKE RHPTCPHPCP  660
LPCHQGECPP CKALIKRSCH CGAMVHVFEC KYFNSMSKEE QIAVRSCRGP CHRKLPNCKH  720
LCPETCHPGP CPSPDKCFKK VTVRCGCQTL KREWLCEDVQ SAYLQAGCDP KDISRNQYGF  780
GLLPCDSDCK SKVKVSDAEL QLRKSKLVEE KEPDTENNVT KRRRRRQRVQ EDKNISTLQK  840
IVSAIRRILL LLIIAVIITT LAYFGYKGLM WLSDWMNEVE THQRRRRYPA I*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	821	826	KRRRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G05660.1	0.0	NF-X1 family protein