PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu028309.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

HD-ZIP

Protein Properties

Length: 289aa MW: 32275.4 Da PI: 8.0561

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu028309.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	57.5	2.2e-18	121	175	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++k+q +Lee F+++++++ +++ L+k+lgL rqV vWFqNrRa+ k Oeu028309.1 121 RKKLRLSKDQSAILEESFKEHNTLNPKQKLALSKRLGLRPRQVEVWFQNRRARTK 175 788899***********************************************98 PP
2	HD-ZIP_I/II	126.9	8.5e-41	121	210	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+rlsk+q+++LEesF+e+++L+p++K +l+++Lgl+prqv+vWFqnrRARtk+kq+E+d+e+Lk+++++l++en+rL+kev+eLr +l Oeu028309.1 121 RKKLRLSKDQSAILEESFKEHNTLNPKQKLALSKRLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKSCCENLTQENRRLQKEVQELR-AL 210 69*************************************************************************************9.55 PP

Sequence ? help Back to Top
Protein Sequence Length: 289 aa Download sequence
MNLEKEGLGL SLSLNFPAEN WISSSSNTSL QLNLMPSLIS SSPSWPSSDR ETRTFLKGID 60 VNRLPTAADL EEEAGVSSPN STISSVSGKR SEREPTGIDE HELERDCSRG ISDEEDGDGS 120 RKKLRLSKDQ SAILEESFKE HNTLNPKQKL ALSKRLGLRP RQVEVWFQNR RARTKLKQTE 180 VDCEFLKSCC ENLTQENRRL QKEVQELRAL KLSPQFYMQM TPPTTLTMCP SCERVAVPSA 240 PSSTTQLATS VEPLPCHVGP VRSRPITFNP WAAAIPHRSP FDALRTRQ*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	120	126	SRKKLRL
2	170	178	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16780.1	4e-96	HD-ZIP family protein