PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu027870.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB_related
Protein Properties Length: 304aa    MW: 33143.5 Da    PI: 10.2787
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu027870.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding37.45.9e-1256100147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      r +WT  E++++++a +++  + Wk+I + +g  +t  q++s+ qky
      Oeu027870.1  56 RESWTDPEHDKFLEALQLFDRD-WKKIEAFIG-SKTVIQIRSHAQKY 100
                      789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
MVSLNPNPPE GFYLDPTGMA LPNLGSFSPT VGASASNGTD DLNKKVRKPY TISKSRESWT  60
DPEHDKFLEA LQLFDRDWKK IEAFIGSKTV IQIRSHAQKY FLKVQKSGTN EHLPPPRPKR  120
KAAHPYPQKA SKVAPVVSQS TSSFQASPTV PVPGSVRRLD SSPLLGHPDR AASMPGRTEN  180
SAQINSSPHL KNGDTISAGQ SLANIKSNPR TRPTVLPDFA QVYKFIGSIF DPNVSGHLQK  240
LKNMDPIDIE TVLLLIRNLS INLASPDFED HRRLLSSYEV ETGKDNGNVG TKTILGSKSL  300
NAT*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.19e-96MYB_related family protein