PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu027564.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | BBR-BPC | ||||||||
Protein Properties | Length: 333aa MW: 37250.1 Da PI: 9.2539 | ||||||||
Description | BBR-BPC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GAGA_bind | 384.2 | 2.1e-117 | 1 | 332 | 1 | 301 |
GAGA_bind 1 mdddgsre..rnkg....yyepa.aslkenlglqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllalllvensl 91 mdd+g+re r+k+ ++ ++ +s+k q+m+++aerda+++ernlalsekk a+aerdma lqrd+a+aern+a+++rdn++++l+++en++ Oeu027564.2 1 MDDSGHREngRHKPplsqWFMQHqPSMK-----QIMAIMAERDAAVQERNLALSEKKVALAERDMAILQRDQAIAERNNAIMKRDNAIATLQYRENTM 93 9999998888988733223334445566.....****************************************************************9 PP GAGA_bind 92 a....salpvgvqvlsgtksidslqqlse..pqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkak..kkkkksekskkkvkke 181 + s++p+g+qv +g+k+i++ qq+++ +++++ ++ + e++ ++ p+ a+e ++++++k+r++ak + + k++ + kk ++++ ++ +k Oeu027564.2 94 NndnmSQCPPGCQVAHGVKHIHHPQQHEHhqSNMGEAPFTTGETHLPDTIPLPPVAPEPEKSRSTKRRKEAKATTSMKKTstSLKK-GKQDGEDLNKT 190 9999999*******************5554699***********999888877766666666655555544444333332213333.22222222222 PP GAGA_bind 182 sader......................skaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiag 257 ++ sk ++k++dl+ln+v++Dest+PvPvCsCtG+lr CYkWGnGGWqS+CCttt+S+yPLP+++++r++R++g Oeu027564.2 191 MFGKSqswkneqdidgdtddlnrqmvvSKPNWKDQDLGLNQVAFDESTMPVPVCSCTGVLRPCYKWGNGGWQSSCCTTTLSMYPLPAVPNKRHSRVGG 288 222113578899************************************************************************************** PP GAGA_bind 258 rKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301 rKmS+gaf+klL++La+eG+dlsnpvDLkdhWAkHGtn+++ti+ Oeu027564.2 289 RKMSGGAFNKLLSRLAGEGHDLSNPVDLKDHWAKHGTNRYITIK 332 *******************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 333 aa Download sequence |
MDDSGHRENG RHKPPLSQWF MQHQPSMKQI MAIMAERDAA VQERNLALSE KKVALAERDM 60 AILQRDQAIA ERNNAIMKRD NAIATLQYRE NTMNNDNMSQ CPPGCQVAHG VKHIHHPQQH 120 EHHQSNMGEA PFTTGETHLP DTIPLPPVAP EPEKSRSTKR RKEAKATTSM KKTSTSLKKG 180 KQDGEDLNKT MFGKSQSWKN EQDIDGDTDD LNRQMVVSKP NWKDQDLGLN QVAFDESTMP 240 VPVCSCTGVL RPCYKWGNGG WQSSCCTTTL SMYPLPAVPN KRHSRVGGRK MSGGAFNKLL 300 SRLAGEGHDL SNPVDLKDHW AKHGTNRYIT IK* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G42520.1 | 1e-137 | BBR-BPC family protein |