PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu027278.3
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family NF-YA
Protein Properties Length: 301aa    MW: 34144.8 Da    PI: 9.5935
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu027278.3genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA43.88.7e-14263296337
    CBFB_NFYA   3 plYVNaKQyqrIlkRRqkRakleeekkldeksrkp 37 
                  p+YVNaKQ ++Il+RRq Rakle+++kl +ksrk 
  Oeu027278.3 263 PIYVNAKQHRAILRRRQIRAKLEAQNKL-AKSRKV 296
                  9***************************.999985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MLNTSTKDLD QTTADSLASF FGTRSSLCRS TRQQQYAPFK ETKSAEEHYF DVKQSESQFH  60
KQDSFSTLSI GQSHYEASAV ERAKSYMQNI ACQSVKTISQ RALIQGYGKL SIIEYIRHPL  120
TALNFIDSVE SGSKKVFRRI FIATKHFPGY DQIIAINLTS SFDIYMFLIW HATPRVFYCH  180
ENHKMKGEDF INPSLLYGNA DNIAHQVQSD QNQSMAHISF PLSESYFGQL VVAYSPNAVQ  240
YPQMVGITSA RVALPLDCTE GMPIYVNAKQ HRAILRRRQI RAKLEAQNKL AKSRKVIVTF  300
*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72830.22e-19NF-YA family protein