PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu026761.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 542aa MW: 59332.6 Da PI: 8.6792

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu026761.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.1	1.6e-05	90	112	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H Oeu026761.1 90 FVCEICNKGFQRDQNLQLHRRGH 112 89*******************88 PP
2	zf-C2H2	12.6	0.00041	166	188	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H +t+ Oeu026761.1 166 WKCEKCSKKYAVQSDWKAHSKTC 188 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 542 aa Download sequence
MMKGLVTQQS HPLIEENVSN LTSASGEASV SSSTNKNDSG VMYPSQYFPP ANDQSQPQLV 60 KKKRNQPGNP DPGAEVIALS PRTLLATNRF VCEICNKGFQ RDQNLQLHRR GHNLPWKLKQ 120 RTSKEVRKKV YVCPETTCVH HDPSRALGDL TGIKKHFCRK HGEKKWKCEK CSKKYAVQSD 180 WKAHSKTCGT REYRCDCGTL FSRRDSFITH RAFCDALAEE RANTITRNPI LTSQASFSTS 240 HINLQISPQF SAHNFPFPIK KEQQNFSSRP EIPPWLASCP PALGPGPIPG SSPPHIDLTP 300 SIFNPRLDQE FSQHEQLFSQ NQNPNPSSGH GPSRASTLPP YNPAASPHIS ATALLQKATQ 360 LGAKTSPCPS LEAMLIRPHQ DHMSAADSGH STTAAFGLNL SSCEKMASGF IDGLALYKNK 420 AAMKGNTDTG APAPAAGDSS TSGPSLLHDM MMNNPGFEGS TFEDAFGGIF NSLRKDGIFH 480 AAHYQFSTGE GSRIDGTTRD FLGLRPISHS DILSITGLDH NCIKTSYEDR NEIENPKSWQ 540 G*

Sequence ? help Back to Top

Protein Sequence Length: 542 aa Download sequence

MMKGLVTQQS HPLIEENVSN LTSASGEASV SSSTNKNDSG VMYPSQYFPP ANDQSQPQLV  60
KKKRNQPGNP DPGAEVIALS PRTLLATNRF VCEICNKGFQ RDQNLQLHRR GHNLPWKLKQ  120
RTSKEVRKKV YVCPETTCVH HDPSRALGDL TGIKKHFCRK HGEKKWKCEK CSKKYAVQSD  180
WKAHSKTCGT REYRCDCGTL FSRRDSFITH RAFCDALAEE RANTITRNPI LTSQASFSTS  240
HINLQISPQF SAHNFPFPIK KEQQNFSSRP EIPPWLASCP PALGPGPIPG SSPPHIDLTP  300
SIFNPRLDQE FSQHEQLFSQ NQNPNPSSGH GPSRASTLPP YNPAASPHIS ATALLQKATQ  360
LGAKTSPCPS LEAMLIRPHQ DHMSAADSGH STTAAFGLNL SSCEKMASGF IDGLALYKNK  420
AAMKGNTDTG APAPAAGDSS TSGPSLLHDM MMNNPGFEGS TFEDAFGGIF NSLRKDGIFH  480
AAHYQFSTGE GSRIDGTTRD FLGLRPISHS DILSITGLDH NCIKTSYEDR NEIENPKSWQ  540
G*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	117	129	KLKQRTSKEVRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44160.1	1e-102	C2H2 family protein