PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu026707.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB_related

Protein Properties

Length: 691aa MW: 77526.7 Da PI: 9.4698

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu026707.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.7	5.4e-08	591	640	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 r ++T E e lv+av++lG+g+W+ + + k+Rt ++k++w ++ Oeu026707.1 591 RRPFTVSEVEALVQAVEKLGTGRWRDVKLRAFdnaKHRTYVDLKDKWKTL 640 679*********************9988889************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 691 aa Download sequence
MVLLKRLDYG FNGYQVPPTP RAARSARRRC EFRRKDYVQK MCAFDLLATV AGKLLLEGRF 60 SPKSVDTSSD KEQTEVVESS DRKGKNDENK PLEEKSFEQD SCERNFLFTE IVSQAPNSNF 120 HAHKLARGQN DACSRPASVI TSESSEKFGS AEPMFNNDCK LRLGIFPHPV DVESSICRSE 180 GETKKQIKIE TPNNRNLAIN NLADTCNVGR SDTWDRKPST LVSSPDCQKF PFCRDQILCG 240 SFPVKQDGVK LVTKDDDENY SGCTKPSTTN KAFRPPPHVG DCRTRKLLPS KYWKPTPNSK 300 DKDPYDPHAE RRNYLNRNNS YKRKRSQRDY PFKKRKFFDC SSVSNSDEGI SSDGISSVPE 360 YGYGGGALGS GPSLTTVPMA PTSLRGERAS FQSRNSHVKL KIKSFRVPEL FIEVPESATI 420 GSLKRTVMEA VTAILGGGLH VGVLLQGKKI RDDNKTLLQT GISHDNKKLD SLGFTLEPTP 480 TQSPLCLEDC SFELPCDTPQ PLARYPPMPN VGQISHPHCN LDTQSNPRGT NLCNFFESDR 540 DSAPFPPNMS LEKTTTDSKA LVSVRPMKAE ALAMVPMRKS KQSESAQRRI RRPFTVSEVE 600 ALVQAVEKLG TGRWRDVKLR AFDNAKHRTY VDLKDKWKTL EHTARISPQQ RRGEPVPQEL 660 LDRVLTAHAF WSQQQVKQQL KSQSETCLLL *

Sequence ? help Back to Top

Protein Sequence Length: 691 aa Download sequence

MVLLKRLDYG FNGYQVPPTP RAARSARRRC EFRRKDYVQK MCAFDLLATV AGKLLLEGRF  60
SPKSVDTSSD KEQTEVVESS DRKGKNDENK PLEEKSFEQD SCERNFLFTE IVSQAPNSNF  120
HAHKLARGQN DACSRPASVI TSESSEKFGS AEPMFNNDCK LRLGIFPHPV DVESSICRSE  180
GETKKQIKIE TPNNRNLAIN NLADTCNVGR SDTWDRKPST LVSSPDCQKF PFCRDQILCG  240
SFPVKQDGVK LVTKDDDENY SGCTKPSTTN KAFRPPPHVG DCRTRKLLPS KYWKPTPNSK  300
DKDPYDPHAE RRNYLNRNNS YKRKRSQRDY PFKKRKFFDC SSVSNSDEGI SSDGISSVPE  360
YGYGGGALGS GPSLTTVPMA PTSLRGERAS FQSRNSHVKL KIKSFRVPEL FIEVPESATI  420
GSLKRTVMEA VTAILGGGLH VGVLLQGKKI RDDNKTLLQT GISHDNKKLD SLGFTLEPTP  480
TQSPLCLEDC SFELPCDTPQ PLARYPPMPN VGQISHPHCN LDTQSNPRGT NLCNFFESDR  540
DSAPFPPNMS LEKTTTDSKA LVSVRPMKAE ALAMVPMRKS KQSESAQRRI RRPFTVSEVE  600
ALVQAVEKLG TGRWRDVKLR AFDNAKHRTY VDLKDKWKTL EHTARISPQQ RRGEPVPQEL  660
LDRVLTAHAF WSQQQVKQQL KSQSETCLLL *

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	322	336	KRKRSQRDYPFKKRK
2	327	336	QRDYPFKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07540.1	1e-128	MYB_related family protein