PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu025871.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family NF-YA
Protein Properties Length: 307aa    MW: 33635.4 Da    PI: 9.6969
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu025871.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA102.83.1e-32162218158
    CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                  +ep+YVNaKQy++Il+RRq+Rak+e ekkl +k rkpylheSRh+hAlrR+RgsgGrF
  Oeu025871.1 162 QEPVYVNAKQYNGILRRRQMRAKAELEKKL-IKVRKPYLHESRHQHALRRARGSGGRF 218
                  69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MQSNSKRVNP GESNLSNVSK SRVHSEPWGN YTGPFPPEMM QGNASDSSSL EKSVDVQSQS  60
EDGMNDEDAA AAKQTSSALP LHPDRNHGVD DRNQFASTVQ PRIEGLMQPP RLELVGHSIA  120
CASNPCDPYY GGIMAAYGQP WVPPRLFDMH PARMPLPLEM EQEPVYVNAK QYNGILRRRQ  180
MRAKAELEKK LIKVRKPYLH ESRHQHALRR ARGSGGRFTK KSDAATSKGD DSSSTVTSQS  240
ISSSGSKALP VKSSEANVPK AQNACHNDVF NFRNQSNEPA FQSTGEGRTS GQQWGNVPSN  300
RAFAMK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12840.15e-58NF-YA family protein