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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu025822.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | C2H2 | ||||||||
Protein Properties | Length: 175aa MW: 20318.1 Da PI: 4.5463 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.6 | 0.0002 | 32 | 54 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C C++ F++ L H++ H Oeu025822.1 32 YECVFCKRGFNTAQALGGHMNIH 54 99*******************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 175 aa Download sequence |
MESNHQEESV NSSEEVEQQD QDKNDLGIGR LYECVFCKRG FNTAQALGGH MNIHRKDRAR 60 NKPTSVNSSR QEENYTVPRF HQQIFSSYQP VQYIESHDQE PLNYRTYFPA STSSARPLYQ 120 QNSLDDRDQQ QANQFGDDWR VDLSLEFVPT VMENLEKKQV IGQEEELDLE LRLG* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06070.1 | 2e-13 | C2H2 family protein |