PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu025061.2
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family HD-ZIP
Protein Properties Length: 780aa    MW: 85455.4 Da    PI: 6.5554
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu025061.2genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox66.24.3e-21125180156
                  TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
     Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                  +++ +++t++q++eLe+lF+++++p++++r eL+k+l L++rqVk+WFqNrR+++k
  Oeu025061.2 125 KKRYHRHTPQQIQELEALFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 180
                  688999***********************************************999 PP
2START192.32.3e-602955191206
                  HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEE CS
        START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetlevi 85 
                  ela++a++elvk+a+ +ep+W +      e++n +e++++f++  +     + +ea+r++g+v+ ++  lve+l+d++ +W e+++    + +t++vi
  Oeu025061.2 295 ELALTAMDELVKMAQIDEPLWLRNLeigkEILNHEEYMRTFTPCISmkpngFATEASRETGMVIINSLALVETLMDSN-KWREMFPfiiaRTSTTDVI 391
                  5899********************99***************9988899999***************************.******************* PP

                  CTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSX CS
        START  86 ssg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlkgrl 176
                  s+g      galqlm aelq+lsplvp R++ f+R+++q+ +g w++vdvS+d  ++    + +  ++++pSg+++++++ng+skvtwveh+++++++
  Oeu025061.2 392 SNGmggtrnGALQLMHAELQVLSPLVPvRKVDFLRFCKQHAEGIWAVVDVSIDAIREAAGAPTFPNCRRFPSGFVVQDMPNGYSKVTWVEHAEYDESV 489
                  *********************************************************999************************************** PP

                  XHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
        START 177 phwllrslvksglaegaktwvatlqrqcek 206
                  +h l+r+l++ g+ +ga++wv+tlq+qce+
  Oeu025061.2 490 VHRLYRPLISAGMGFGAQRWVSTLQQQCEC 519
                  ****************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 780 aa     Download sequence    
MNFGGFLDKN SGGGGGSVGG GGGVKIATDI PYSNGNNNMP TGPIAQPHLV SQSLSTKPMF  60
NSPGLSLQTG MDGQGEVARM GENYESSIVG CRRSRDEEHE SRSGSDNMDG ASGDDQDASD  120
KPPRKKRYHR HTPQQIQELE ALFKECPHPD EKQRLELSKR LCLETRQVKF WFQNRRTQMK  180
TQLERHENSI LRQENDKLRA ENMSFRDAMK NPICNNCGGS AIIGEISLEE QHLRIENARL  240
KDELDRVCAL AGKFLGRPIS LLAASTMGTP MPNSSLEFGF GSNGFGDLNR SMYLELALTA  300
MDELVKMAQI DEPLWLRNLE IGKEILNHEE YMRTFTPCIS MKPNGFATEA SRETGMVIIN  360
SLALVETLMD SNKWREMFPF IIARTSTTDV ISNGMGGTRN GALQLMHAEL QVLSPLVPVR  420
KVDFLRFCKQ HAEGIWAVVD VSIDAIREAA GAPTFPNCRR FPSGFVVQDM PNGYSKVTWV  480
EHAEYDESVV HRLYRPLISA GMGFGAQRWV STLQQQCECL AILMSTVTSR DHMAITPSGR  540
RSMLKLAHRM TDNFCAGVCP STVHEWNSFS TGNVDEDVRV MTRKSVDDPG EPPGIVLSAS  600
TSVWLPVSPQ RLFDFLRNER LRSEWDILSN GGPMQEMAHI AKGQDHGNCV SLLRASAMNA  660
SQRSMLILQE TCIGPAGSLV VYAPVDIPAM QVVMNGGDSA YVALLPSGFA IMPAGPGSRG  720
PTMDGGPGNR TSGSLLTVAF QILVNSLPAA KLTVESVETV KNLISCTVQK IKCALNCES*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.10.0HD-ZIP family protein