PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu025035.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

ARF

Protein Properties

Length: 381aa MW: 42344.2 Da PI: 8.2432

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu025035.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	33	1e-10	250	292	55	99
ETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 55 ksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 +++r++lt+GW+ Fv+a++L +gD+v+F ++++ +l+++++r+ Oeu025035.1 250 QPKRHLLTTGWSVFVSAKRLVAGDSVLFI--WNEKNQLFLGIRRA 292 5678***********************..8889999**997 PP
2	Auxin_resp	75.3	1.7e-25	317	378	1	60
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrl.s 60 aahaast+s F+++YnPras+seFv++++k++ka + ++vsvGmRf+m fete+s r++ s Oeu025035.1 317 AAHAASTNSCFTIFYNPRASPSEFVIPLSKYVKAAYhTRVSVGMRFRMLFETEESGVRSTsS 378 79****************************9998789**************9999744 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
MGKMREELEL KMSWDLGFEI FGIESKRVEL NMKLSTSGMS QQVHEGEKKC LNSELWHACA 60 GPLVSLPTIG SRVVYFPQGH SEQVAATTNK EVDAHIPNYP SLPPQLICQL HNVTMHADVE 120 TDEVYAQMTL QPLTPQEQKD TYLPVELGTP SRQPTNYFCK TLTASDTSTH GGFSVPRRAA 180 EKVFPPLDFS QTPPAQELIA RDLHDVDWKF RHIFRGTPEV KKNSNRQEVG LGVQSSILHS 240 LVNVTEQGSQ PKRHLLTTGW SVFVSAKRLV AGDSVLFIWN EKNQLFLGIR RATRPQTVMP 300 SSVLSSDSMH IGLLAAAAHA ASTNSCFTIF YNPRASPSEF VIPLSKYVKA AYHTRVSVGM 360 RFRMLFETEE SGVRSTSSGK *

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

MGKMREELEL KMSWDLGFEI FGIESKRVEL NMKLSTSGMS QQVHEGEKKC LNSELWHACA  60
GPLVSLPTIG SRVVYFPQGH SEQVAATTNK EVDAHIPNYP SLPPQLICQL HNVTMHADVE  120
TDEVYAQMTL QPLTPQEQKD TYLPVELGTP SRQPTNYFCK TLTASDTSTH GGFSVPRRAA  180
EKVFPPLDFS QTPPAQELIA RDLHDVDWKF RHIFRGTPEV KKNSNRQEVG LGVQSSILHS  240
LVNVTEQGSQ PKRHLLTTGW SVFVSAKRLV AGDSVLFIWN EKNQLFLGIR RATRPQTVMP  300
SSVLSSDSMH IGLLAAAAHA ASTNSCFTIF YNPRASPSEF VIPLSKYVKA AYHTRVSVGM  360
RFRMLFETEE SGVRSTSSGK *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G30330.1	0.0	ARF family protein