PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu024738.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB_related
Protein Properties Length: 270aa    MW: 29349.6 Da    PI: 6.0345
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu024738.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.52.8e-123573140
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40
                     +g WT eEd++l+ +v+q+G + W  Ia++m  gR +kqc
      Oeu024738.1 35 KGQWTGEEDKRLISLVHQFGLRKWVVIAEEMV-GRVGKQC 73
                     799*****************************.******* PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MTSGENLSVN VIATPVNPDQ KEKRDGSSSS EYQIKGQWTG EEDKRLISLV HQFGLRKWVV  60
IAEEMVGRVG KQCPLNLDQP RQIRALVQID RHGLPSFRVV ALLLFGGHVY APLPFLNLDD  120
ATSDLRRPSE VRVCIEVNLR ADKDKDEVTF VEPKKQWVPV LAVPSVLPTT TITVVTESAS  180
VPAVPTSTPI TVDLEAPPYI HSITDPTPNA PIEVPTSPII TSIAPIPTAT TDVSPELTHI  240
SSPPLKTYID GTQSAKGLGT RRVPQTTFT*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58850.16e-14MYB family protein