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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu024588.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | MYB_related | ||||||||
Protein Properties | Length: 200aa MW: 21644.5 Da PI: 9.6707 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 42.8 | 1.2e-13 | 107 | 151 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ ++ + ++lG+g+W+ I+r++ ++Rt+ q+ s+ qky Oeu024588.1 107 PWTEEEHGMFLTGLEKLGKGDWRGISRKFVTTRTPTQVASHAQKY 151 7*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 200 aa Download sequence |
MGRKCSQCGH IGHNSRTCTI SRWSVNGGLR LFGVQLELSS PSSIPTEKCF NVDCSSPSSL 60 PAAASSTSPS SSLSSIVSIN EKSDKAFVGS LSDGHLAQVQ ERKKGIPWTE EEHGMFLTGL 120 EKLGKGDWRG ISRKFVTTRT PTQVASHAQK YFLRQASLCK KKKRSSLFDM VSDANSEANS 180 DQEVDKTTSG MIKNVKILE* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G56840.1 | 1e-51 | MYB_related family protein |