PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu024516.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

BBR-BPC

Protein Properties

Length: 294aa MW: 31941.2 Da PI: 6.0337

Description

BBR-BPC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu024516.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GAGA_bind	72	2.4e-22	1	106	1	103
GAGA_bind 1 mdddgsre..rnkg....yyepa.aslkenlglqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllalllvensl 91 mdd+g+re rnk+ ++ ++ +s+k q+m ++aerda+i+ernlalsekkaa+aerd+a lqrd+a+ ern+a++erdn++++l+++en++ Oeu024516.1 1 MDDSGHREngRNKPpqgqWFMQHqPSMK-----QIMGIMAERDAAIQERNLALSEKKAALAERDVAILQRDSAMVERNNAIMERDNAIATLQYRENAM 93 9999999889988643344555556666.....****************************************************************9 PP GAGA_bind 92 asal.pvgvqvls 103 ++ + ++ ++v+s Oeu024516.1 94 NNGKsGPDIGVSS 106 9544144444444 PP
2	GAGA_bind	191.7	8.6e-59	111	204	183	275
GAGA_bind 183 ad.erskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaae 275 + + k ++k++dl+ln+v++Dest+PvPvCsCtG+ r CYkWGnGGWqS+CCtt++S+yPLP+++++r+aR++grKmS++af+klL++Laae Oeu024516.1 111 RQlGEEKPDWKDQDLGLNQVAFDESTMPVPVCSCTGVFRPCYKWGNGGWQSSCCTTNLSMYPLPAVPNKRHARVGGRKMSGSAFNKLLSRLAAE 204 333679**************************************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 294 aa Download sequence
MDDSGHRENG RNKPPQGQWF MQHQPSMKQI MGIMAERDAA IQERNLALSE KKAALAERDV 60 AILQRDSAMV ERNNAIMERD NAIATLQYRE NAMNNGKSGP DIGVSSDEHN RQLGEEKPDW 120 KDQDLGLNQV AFDESTMPVP VCSCTGVFRP CYKWGNGGWQ SSCCTTNLSM YPLPAVPNKR 180 HARVGGRKMS GSAFNKLLSR LAAEDDAVVV VGASAVGDQP HFTSLSPTRF SDDLLWPLVY 240 EFVCSGSGGG GAPDSGCVRW WCYWRLLLTV VILGGNGGGG CAMVVAMAVI VME*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G21240.1	6e-64	BBR-BPC family protein