PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu024497.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family C2H2
Protein Properties Length: 235aa    MW: 26195.9 Da    PI: 7.7252
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu024497.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H218.17.4e-067395123
                 EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                 ++C++C++ F+++  L  H++ H
  Oeu024497.1 73 FECHYCNRNFPTSQALGGHQNAH 95
                 89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MEKSEIETRD FMNVESFSQL PFIRPAPVKE KAIKLFGKEF VGDSTANNES EPSENLSREE  60
TKNVDNGDSG RKFECHYCNR NFPTSQALGG HQNAHKRERQ NAKRAHLQSA LIHGGLSDPH  120
VYGVMDYCLG SAPPATMPYH HSWSNRSNYS CTSDSRLYGT HHGSNTQPPV SGSPLAAWRV  180
PSLQSSPNFM HQLPSFYDGR LQLSSNNNPN SRNRLGYEPK PSMQDGHVSL DLHL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41940.17e-40C2H2 family protein