PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu023264.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

Trihelix

Protein Properties

Length: 444aa MW: 51522 Da PI: 6.2104

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu023264.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	74.7	1.5e-23	111	208	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk...........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdqle 86 +Wt+ +v++Li+a++++ e+ + +kk++W++vsk+m+erg +sp+qC++k+++lnkryk+++e+ +++ ++e+++ +++d ++ Oeu023264.1 111 KWTDAMVRLLITAVSYISEEAAPEYggvvrrkcaslQKKGKWKSVSKVMAERGHFVSPQQCEDKFNDLNKRYKRLNEILGRGtSCEVVEDPSLLDVMD 208 7************988888854233444556777********************************************6699999999999887 PP

Sequence ? help Back to Top
Protein Sequence Length: 444 aa Download sequence
MMQQNGSYGG FDLQGSTRIR HHQQNQLAPH QHHSHPRQGS SIVHSTIHEN FPLTIGSMRD 60 QDQTFSMADY DRRERRKSAS DEDEPSFMEE NADGSSDPSR GKKASPWHRV KWTDAMVRLL 120 ITAVSYISEE AAPEYGGVVR RKCASLQKKG KWKSVSKVMA ERGHFVSPQQ CEDKFNDLNK 180 RYKRLNEILG RGTSCEVVED PSLLDVMDHI SEKAKEEVRK ILSSKHLHYE EMCSYHNGNR 240 LHLPPDPELQ RSLHLALGNR DDHDDSDVKR HSKDYNEEVD QEDELDDHDE SEDNNVLSGD 300 HMAYGMPGSS TKRIKQYQDH EDFSFGNSLN FLDHNRTSNF QAVNVDADAD ADTDAKQGSP 360 EGMKTNRLQK QWINHRALQL EEQRLHLHEQ MLELEKDRFK WQRFCQKKDR EMEMARMELE 420 RMKLENERMA LELRQKEIGI DNS*

Sequence ? help Back to Top

Protein Sequence Length: 444 aa Download sequence

MMQQNGSYGG FDLQGSTRIR HHQQNQLAPH QHHSHPRQGS SIVHSTIHEN FPLTIGSMRD  60
QDQTFSMADY DRRERRKSAS DEDEPSFMEE NADGSSDPSR GKKASPWHRV KWTDAMVRLL  120
ITAVSYISEE AAPEYGGVVR RKCASLQKKG KWKSVSKVMA ERGHFVSPQQ CEDKFNDLNK  180
RYKRLNEILG RGTSCEVVED PSLLDVMDHI SEKAKEEVRK ILSSKHLHYE EMCSYHNGNR  240
LHLPPDPELQ RSLHLALGNR DDHDDSDVKR HSKDYNEEVD QEDELDDHDE SEDNNVLSGD  300
HMAYGMPGSS TKRIKQYQDH EDFSFGNSLN FLDHNRTSNF QAVNVDADAD ADTDAKQGSP  360
EGMKTNRLQK QWINHRALQL EEQRLHLHEQ MLELEKDRFK WQRFCQKKDR EMEMARMELE  420
RMKLENERMA LELRQKEIGI DNS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21200.1	1e-122	Trihelix family protein