PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu022623.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

TCP

Protein Properties

Length: 388aa MW: 41623.1 Da PI: 7.2762

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu022623.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	131.4	8.8e-41	75	234	2	121
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg.......... 88 ++k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++ + s +ss+s+ s++ Oeu022623.1 75 PVKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSSMSIPsqlrssyfnp 172 789******************************************************************99988888888888777777777888888 PP TCP 89 ............................kaaksaa.kskksqksaasalnlakesrakarar 121 +aa+ ++ + + +q+ ++ l+l + + + r+r Oeu022623.1 173 sfsmpqrrgllpgiglpsegslgtllnfQAANLNPsSMQAKQEIRENSLDLTETEESIGRKR 234 88899999999999999888888888873333333233444444444455555333222222 PP

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence
MEGGDDHLHH QRRHDNFPFQ FLEKKEDEVS CSTSSAAYPT LGISGDAINP NATTRSLTTT 60 TSTLDISADP SKKPPVKRTS TKDRHTKVDG RGRRIRMPAL CAARVFQLTR ELGHKSDGET 120 IEWLLQQAEP AVIAATGTGT IPANFTSLNI SLRSSGSSMS IPSQLRSSYF NPSFSMPQRR 180 GLLPGIGLPS EGSLGTLLNF QAANLNPSSM QAKQEIRENS LDLTETEESI GRKRRAEQEL 240 QQTQHYQMNN YLLQSSTGAM QSSHASVPAN FWMVANSNNQ VMGGGEPIWT FPSVNNNNAA 300 AALYRGSMSS GLHFMNFPTP VAVVPSQQIG ANIGGGGGGS NGLGEGQLAL LAGLNSYRPV 360 SVMSESHASE PSHHGGDDRH DTTSHHS*

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence

MEGGDDHLHH QRRHDNFPFQ FLEKKEDEVS CSTSSAAYPT LGISGDAINP NATTRSLTTT  60
TSTLDISADP SKKPPVKRTS TKDRHTKVDG RGRRIRMPAL CAARVFQLTR ELGHKSDGET  120
IEWLLQQAEP AVIAATGTGT IPANFTSLNI SLRSSGSSMS IPSQLRSSYF NPSFSMPQRR  180
GLLPGIGLPS EGSLGTLLNF QAANLNPSSM QAKQEIRENS LDLTETEESI GRKRRAEQEL  240
QQTQHYQMNN YLLQSSTGAM QSSHASVPAN FWMVANSNNQ VMGGGEPIWT FPSVNNNNAA  300
AALYRGSMSS GLHFMNFPTP VAVVPSQQIG ANIGGGGGGS NGLGEGQLAL LAGLNSYRPV  360
SVMSESHASE PSHHGGDDRH DTTSHHS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47620.1	5e-60	TCP family protein