PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu022578.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family HSF
Protein Properties Length: 338aa    MW: 37703.3 Da    PI: 5.8277
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu022578.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind116.12.1e-36261162101
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Fl+k+y++++d +++++isw+e+g++f+v++++efa+++LpkyFkh+nf+SFvRQLn+YgF+kv  ++         weF+++ F+kg+k+ll++i+
   Oeu022578.1  26 FLTKTYQLVNDYTIDDIISWNEEGSAFIVWNPTEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDR---------WEFSNECFRKGEKKLLCDIQ 113
                   9*****************************************************************99.........******************** PP

                   XXX CS
  HSF_DNA-bind  99 rkk 101
                   r+k
   Oeu022578.1 114 RRK 116
                   *98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MAPPPVDRNG GESTAGEMPR CVPTPFLTKT YQLVNDYTID DIISWNEEGS AFIVWNPTEF  60
ARDLLPKYFK HNNFSSFVRQ LNTYGFRKVV PDRWEFSNEC FRKGEKKLLC DIQRRKIATP  120
SSTSAAPSVT EAAAQVVQCT PQPRATSLTD SGEEQVLSSS NSPQVVSETS GGTTDLIREN  180
DRLRKENVQL NKELGKMKSL CNNVYAMMSN YATNCSSHEY GDHNNRVQST EPLDLLPMKR  240
FCKQLQGVAT AVNGGVEKNM RLEAEELSSR LFGVPIGVKR GREIEGGGSV EHEMELQLQQ  300
PGMGVKSEPL DRRNSLDDQA IMRLEGLDSR DQKTGNW*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62020.15e-84HSF family protein