PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu022278.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 363aa    MW: 41120.4 Da    PI: 4.5852
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu022278.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.95e-102883281055
                  HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +rRR+riN+++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  Oeu022278.1 288 QRRRERINERLRILQNLVPNG-----TKVDISTMLEEAVHYVKFLQ 328
                  79*****************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 363 aa     Download sequence    
MEPIGAFFDE EWESLSKMFS IEDSDFMWHF HGSESFWNQV ENGLSSQIPS NFLDITEVDV  60
AAGVDETVLF STDHALDTTN FYYVSQESSN NSTENDSVFF TNPESVVNFP DQSTQFCIVD  120
QKNDHNFPAS FPTDHAMEDI LFIKEEMGSG QLEKLKSPTA EIGDSVKEMQ FKRKSETPEE  180
KLEENSPRKK SRVPRDASRN EPRINGQKKK NKNVNKNCND ELEVTDGGEN GRSTSSCSPE  240
DDCNGSQELN GVENSESKGS ATVNSNSKAR ASRGSATDPQ SLYARILQRR RERINERLRI  300
LQNLVPNGTK VDISTMLEEA VHYVKFLQLQ IKVWEKNVPL IIFLYVRYTI VDIKLKDFTS  360
FS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33880.12e-24bHLH family protein