PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu022242.2

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

SBP

Protein Properties

Length: 701aa MW: 79505.5 Da PI: 6.3198

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu022242.2	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	117.3	7.7e-37	126	202	1	77
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +Cqv++Cead+se+k yh+rh++C +++a++v+++g+++r+CqqC++fh ls+fDe+krsCrr+L++hn+rrrk++ Oeu022242.2 126 RCQVPECEADISELKGYHKRHRICLRCANASSVILDGESKRYCQQCGKFHILSDFDEGKRSCRRKLERHNRRRRKPN 202 6**************************************************************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 701 aa Download sequence
MPSTITHNFP DEPTSSSLFD WSDFLEFELD DSINLSFDPI NPHQMIPESG IETGVDEGQS 60 QETVIPGRVR KRDPTLVCPN FLAGRIPCAC PELDEKLEEE DEMGGVRSGK KRVRTLRVSG 120 GGAPARCQVP ECEADISELK GYHKRHRICL RCANASSVIL DGESKRYCQQ CGKFHILSDF 180 DEGKRSCRRK LERHNRRRRK PNDTKGSFEM EPQQGTLTDN VSGDNDTGKD MMHLSSQIPE 240 REFLLESEGH ALSAGSVETH NDEDKENQKY TNSTSYRENK SAFSSLCPTG RISFKLYDWN 300 PAEFPRRLRH QIFEWLASMP VELEGYIRPG CTILTAFVAM PKFMWVKLLE ESAVRIQDLV 360 FSPGNMLSGR GTMLVYLNDM IFRVTKDGAS VVKVKVKGQA PKIHYIHPTC FEAGKPLEFV 420 ACGSNLLQPN FRFLVSFAGR YLAYDISVSS VACKSEGDRS SLDHQLLKIH VPQTDPDIFG 480 PAFIEVENQS GLSNFIPILI GDKEICAEMA IMQQKYDSSL CSDGHQFAAP TLACQVYALR 540 QTEFYEFLLE VAWSLKPMLE PHMTAAQMHR INYLLSFLIE KESTTILGRI LYRMKTVTDK 600 NLITNVPIAD MRIFQEHLNN ARNLLRQKLQ EKDYLVTHVT DGNDFSQSSQ NDFRIDVRAA 660 IHVWTSYFVH KFLVEKLQKD LEPISLVAWS PTFEREQVGP *

Sequence ? help Back to Top

Protein Sequence Length: 701 aa Download sequence

MPSTITHNFP DEPTSSSLFD WSDFLEFELD DSINLSFDPI NPHQMIPESG IETGVDEGQS  60
QETVIPGRVR KRDPTLVCPN FLAGRIPCAC PELDEKLEEE DEMGGVRSGK KRVRTLRVSG  120
GGAPARCQVP ECEADISELK GYHKRHRICL RCANASSVIL DGESKRYCQQ CGKFHILSDF  180
DEGKRSCRRK LERHNRRRRK PNDTKGSFEM EPQQGTLTDN VSGDNDTGKD MMHLSSQIPE  240
REFLLESEGH ALSAGSVETH NDEDKENQKY TNSTSYRENK SAFSSLCPTG RISFKLYDWN  300
PAEFPRRLRH QIFEWLASMP VELEGYIRPG CTILTAFVAM PKFMWVKLLE ESAVRIQDLV  360
FSPGNMLSGR GTMLVYLNDM IFRVTKDGAS VVKVKVKGQA PKIHYIHPTC FEAGKPLEFV  420
ACGSNLLQPN FRFLVSFAGR YLAYDISVSS VACKSEGDRS SLDHQLLKIH VPQTDPDIFG  480
PAFIEVENQS GLSNFIPILI GDKEICAEMA IMQQKYDSSL CSDGHQFAAP TLACQVYALR  540
QTEFYEFLLE VAWSLKPMLE PHMTAAQMHR INYLLSFLIE KESTTILGRI LYRMKTVTDK  600
NLITNVPIAD MRIFQEHLNN ARNLLRQKLQ EKDYLVTHVT DGNDFSQSSQ NDFRIDVRAA  660
IHVWTSYFVH KFLVEKLQKD LEPISLVAWS PTFEREQVGP *

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	184	201	KRSCRRKLERHNRRRRKP
2	188	199	RRKLERHNRRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18830.2	0.0	SBP family protein