PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu021812.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 526aa MW: 57471.2 Da PI: 5.1615

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu021812.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	29.4	1.5e-09	343	391	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR+ri +++ L++l+P + sk Ka +L + ++Y++sLq Oeu021812.1 343 NSHSLAERLRRERISERMKFLQDLVPGC----SKITGKAVMLDEIINYVQSLQ 391 58************************....899***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 526 aa Download sequence
MDIAGKDATI EPEKGNENPV NYCATNMSSD WPLNDNYLPN TSVGMIPRGN SIMESSACSS 60 APMVDSFCPL IWDQPVSEQN RGYCHVNIQN NARTSDSFGP SAGTGWIPDT MLRDDMFLPT 120 VQGMVPQSLP QLPSDSGFIE RAARFSCFSG GNFGDMMNPF SVPEYLNSYS GMLASVQGQH 180 EVFAGDGTKL NTTESSKEAS LPLVYGTEGS PLKNEKMREC LPCSREEAQQ GVCTLANDSD 240 EAEFSSRGDQ EELEGSPRES SGKGVESKKR KGTEQSTALN VNNRALKPSA KTAKDDAEIQ 300 NKDDLNPTTS KPSGKHGKKG LQWPDLPKEE YIRVRARRGQ ATNSHSLAER LRRERISERM 360 KFLQDLVPGC SKITGKAVML DEIINYVQSL QRQVEFLSMK LATVNPWLNF SIEGLLTKDI 420 FQSRIGSSSS LGFPPDVTIP YPPPHQTPPG LIQPDLSSLA NSSNALRRSI NSPFTPAFRE 480 STSQAPSMWE DELHNVVQMG ISSSAHLSSQ DLSGSLPPRH IKAEP*

Sequence ? help Back to Top

Protein Sequence Length: 526 aa Download sequence

MDIAGKDATI EPEKGNENPV NYCATNMSSD WPLNDNYLPN TSVGMIPRGN SIMESSACSS  60
APMVDSFCPL IWDQPVSEQN RGYCHVNIQN NARTSDSFGP SAGTGWIPDT MLRDDMFLPT  120
VQGMVPQSLP QLPSDSGFIE RAARFSCFSG GNFGDMMNPF SVPEYLNSYS GMLASVQGQH  180
EVFAGDGTKL NTTESSKEAS LPLVYGTEGS PLKNEKMREC LPCSREEAQQ GVCTLANDSD  240
EAEFSSRGDQ EELEGSPRES SGKGVESKKR KGTEQSTALN VNNRALKPSA KTAKDDAEIQ  300
NKDDLNPTTS KPSGKHGKKG LQWPDLPKEE YIRVRARRGQ ATNSHSLAER LRRERISERM  360
KFLQDLVPGC SKITGKAVML DEIINYVQSL QRQVEFLSMK LATVNPWLNF SIEGLLTKDI  420
FQSRIGSSSS LGFPPDVTIP YPPPHQTPPG LIQPDLSSLA NSSNALRRSI NSPFTPAFRE  480
STSQAPSMWE DELHNVVQMG ISSSAHLSSQ DLSGSLPPRH IKAEP*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	350	355	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68920.3	2e-92	bHLH family protein