PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu021564.2
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 550aa    MW: 60764.9 Da    PI: 5.4447
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu021564.2genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS284.92.3e-871885482374
         GRAS   2 velLlecAeavssgdlelaqalLarlsel.aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98 
                  v+ L++ Ae++++++ +l q  La+l+++ +sp+g+p+qR+a+yf+eAL++ l++    l    ++ ++s+++ +++++a+k+fs +sP++ fs ++a
  Oeu021564.2 188 VDELIRLAECFETNSPQLGQVSLAQLNQQlRSPTGKPLQRAAFYFKEALQSLLSG----LT--RQTHPASSSEIIQAIKAQKMFSGISPVPMFSSFMA 279
                  678************************998************************9....44..3445555557************************* PP

         GRAS  99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp....egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlele 192
                  Nqa+lea+eg+ +vHiiDfdi+ G +W++ l++La+++      p +lRiT++++++   + e + ++e+L++fA+el+++++++++  +++e  +++
  Oeu021564.2 280 NQAVLEALEGSIHVHIIDFDIGLGSHWASYLKELADKAelgkLTPGMLRITAIVPEK--YAMESKLIKENLTQFARELNIRLDIDFVSISTFEYSSFN 375
                  *************************************977533467*********55..999999**********************99********* PP

         GRAS 193 eLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh..nsesFlerflealeyysalfdsl.eaklpres.....eer 282
                  ++++   E++aV l+ +++r +          + +L+ + ++sP vvv ve+e ++  +++sF + +++ l++ys+lf+sl +a++ + s     ++ 
  Oeu021564.2 376 AIKLMDSENVAVLLSPAIFRHV---------GTGFLDDLHRVSPLVVVYVESEGQTgfEAPSFRQTLIDGLDFYSSLFESLeAANF-KSSggcsvDWI 463
                  ********************98.........368*******************99866888********************55555.44447778899 PP

         GRAS 283 ikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                  + +E  +l ++i+++v ++ ++          W+e+l +aG+++v ls++a  qa++llr+ +  g++v +++++++l+W++rpLv++SaWr
  Oeu021564.2 464 RRIETSVLLPKIMEAVEAASRR-------NTPWKEALVAAGLRQVGLSQFADFQAECLLRRANIIGFHVAKQQEEMLLCWHNRPLVATSAWR 548
                  99**************998886.......679***********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 550 aa     Download sequence    
MKVTFSGNNH NQSLNSKPVV TTTLTTTSRG NTAPTTSLYE PKSVPELCGN PSPVAKKVIS  60
TCATANISTI RDDPLQLGDH ALNHHFEVWD SLMRELGLDD DSIPVSKPIS QLGTHCDQQY  120
SSIPEFPPVS SFDSSTRFEP SEFSILSDIT TTYSPAPLSH NSNIIHPFDL SGEIQNLNNN  180
LNIGFDYVDE LIRLAECFET NSPQLGQVSL AQLNQQLRSP TGKPLQRAAF YFKEALQSLL  240
SGLTRQTHPA SSSEIIQAIK AQKMFSGISP VPMFSSFMAN QAVLEALEGS IHVHIIDFDI  300
GLGSHWASYL KELADKAELG KLTPGMLRIT AIVPEKYAME SKLIKENLTQ FARELNIRLD  360
IDFVSISTFE YSSFNAIKLM DSENVAVLLS PAIFRHVGTG FLDDLHRVSP LVVVYVESEG  420
QTGFEAPSFR QTLIDGLDFY SSLFESLEAA NFKSSGGCSV DWIRRIETSV LLPKIMEAVE  480
AASRRNTPWK EALVAAGLRQ VGLSQFADFQ AECLLRRANI IGFHVAKQQE EMLLCWHNRP  540
LVATSAWRY*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36710.11e-132GRAS family protein