PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu021243.2

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

SBP

Protein Properties

Length: 332aa MW: 37488.2 Da PI: 8.9587

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu021243.2	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	112.9	1.9e-35	50	137	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSS..........EEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsr..........fhelsefDeekrsCrrrLakhnerrrkkqa 78 +CqvegC+ dl+ +k+yhrrh++Ce+hsk+p+v+v+g+e+rfCqqCsr fh lsefD++krsCrrrL++hn+rrr+ q+ Oeu021243.2 50 CCQVEGCNLDLTLVKDYHRRHRICEIHSKSPKVIVAGMERRFCQQCSRqvslysaiylFHGLSEFDDNKRSCRRRLSDHNARRRRLQP 137 6********************************************99999999999************************9886 PP

Sequence ? help Back to Top
Protein Sequence Length: 332 aa Download sequence
MEKISGSSGE SFNCLELGKQ KVYRLAPSIP VSYPATKRSR ASYQKAQNPC CQVEGCNLDL 60 TLVKDYHRRH RICEIHSKSP KVIVAGMERR FCQQCSRQVS LYSAIYLFHG LSEFDDNKRS 120 CRRRLSDHNA RRRRLQPEPI HFTTAGLSSS FYERTSQNVQ FNVLPISGSN RRRETICNSM 180 LTQAGDSLIR PSKTGGIDER PCFPNDEMPS AVYNLKVESE RLLSLQSPNP RILDQYLPSA 240 SSLLSVDNPW SLNRDESISM EGLMHRNASV DNPIRLQNWP FAQAVANEGP SVSPVHSTSL 300 HNSGSSLLQE FDLFKTPYDS GSFHINYQRN I*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43270.1	8e-39	SBP family protein