PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu021063.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 329aa MW: 37203.3 Da PI: 8.8138

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu021063.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.2	3.4e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+ +++++G g+W++ ++ g+ R++k+c++rw +yl Oeu021063.1 14 KGPWTAEEDQKLLAYIEEHGHGSWRALPEAAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	53.3	6.4e-17	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+++ +E++ +v+++++lG++ W+tIa +++ +Rt++++k++w+++ Oeu021063.1 67 RGKFSLQEEQTIVQLHALLGNR-WSTIATYLP-KRTDNEIKNYWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 329 aa Download sequence
MGKSLCCEKV GLKKGPWTAE EDQKLLAYIE EHGHGSWRAL PEAAGLQRCG KSCRLRWTNY 60 LRPDIKRGKF SLQEEQTIVQ LHALLGNRWS TIATYLPKRT DNEIKNYWNT HIKKRLTKMG 120 IDPVTHKKKT LCTNQSKDTA NLDHIAQWEN ARLQAEARFI RESKLVSNCY RSQLQLLQKA 180 IVPPPQALPS PPRPPCLDVL KVWQGEWTKP TKDTTTISTL NFSSQNKFNA IPTTYGFNDN 240 SSTMPINYVE NSVHMINGRI INPIDDSTSI TDSLSVPSFL ESFTDLLPNM DGLTDDVVGS 300 YDGSFKENKN YWNNELNSMA FPMGSPVL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01140.1	4e-97	MYB family protein