PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu021009.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 508aa MW: 56439 Da PI: 6.6196

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu021009.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	21.1	8.4e-07	264	285	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C++Cgk F+r nL+ H+r H Oeu021009.1 264 FCTICGKGFKRDANLRMHMRGH 285 6*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 508 aa Download sequence
MDPEDKICED TWIKSSSSHE SCEPPNNQHL TSFDSLQQKM DGSSSFLDYG TTFDEQFPSF 60 NQPSVAHKIN DKYPVLGKHD NQMSEAQPLN KVEDWDPRAT LNNLSFLEKK IHQLRDMVHW 120 IVGQREQVMD QRDQLLVHQQ QLITTNLTSI IVQMISTAGS LLPSVKHTVS SSSAINSLGH 180 FGGVQNSSGI FPNIGIPNVN NVNKVDTSNQ TDLTGFCGAE QNCSVEDHEL KSDDDADEGE 240 NLPPGSYEIL QLEKEEILAP HTHFCTICGK GFKRDANLRM HMRGHGDKYK TPAALAKPSK 300 ESTSESMLIK RYSCPYVGCK RNKDHKKFQP LKTILCVKNH YKRTHCDKTY TCSRCNAKKF 360 SVLADLKTHE KHCGRDKWLC SCGTTFSRKD KLFGHISLFQ GHTPAIPVDG PSDAGQSSEA 420 PKVGQMDFNF KSSAPSGSAF QNAMDVKFSG DDATSISPLN FDTSVSGFNE FPRPPFEDVG 480 SSFSFLLSDA YGYPPKNGRY SNSNDVE*

Sequence ? help Back to Top

Protein Sequence Length: 508 aa Download sequence

MDPEDKICED TWIKSSSSHE SCEPPNNQHL TSFDSLQQKM DGSSSFLDYG TTFDEQFPSF  60
NQPSVAHKIN DKYPVLGKHD NQMSEAQPLN KVEDWDPRAT LNNLSFLEKK IHQLRDMVHW  120
IVGQREQVMD QRDQLLVHQQ QLITTNLTSI IVQMISTAGS LLPSVKHTVS SSSAINSLGH  180
FGGVQNSSGI FPNIGIPNVN NVNKVDTSNQ TDLTGFCGAE QNCSVEDHEL KSDDDADEGE  240
NLPPGSYEIL QLEKEEILAP HTHFCTICGK GFKRDANLRM HMRGHGDKYK TPAALAKPSK  300
ESTSESMLIK RYSCPYVGCK RNKDHKKFQP LKTILCVKNH YKRTHCDKTY TCSRCNAKKF  360
SVLADLKTHE KHCGRDKWLC SCGTTFSRKD KLFGHISLFQ GHTPAIPVDG PSDAGQSSEA  420
PKVGQMDFNF KSSAPSGSAF QNAMDVKFSG DDATSISPLN FDTSVSGFNE FPRPPFEDVG  480
SSFSFLLSDA YGYPPKNGRY SNSNDVE*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34370.2	1e-174	C2H2 family protein