PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu020630.2

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

Whirly

Protein Properties

Length: 281aa MW: 31143.7 Da PI: 9.8975

Description

Whirly family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu020630.2	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Whirly	66.1	6.4e-21	80	146	1	67
Whirly 1 svyktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvd 67 s+yk+kaal+ +++ptf++l+sg ++++r+G ++l++ +a++erkydW+kkq a+s t v+ + Oeu020630.2 80 SIYKGKAALSASPILPTFSKLESGGIRVDRRGVIFLTFWPAIGERKYDWDKKQDVAISRTFVTFACS 146 7**********************************************************98876555 PP
2	Whirly	113.8	1.2e-35	156	242	53	139
Whirly 53 qsfalsatevaelvdlaskesceffhdpaakgsneGkvrkalkvePlpdGsGlfvnlsvtnslvkgnesfsvPvskaefavlrsllv 139 ++falsatev++l++l++k+sceffhdp++ +sn+G+vrk+l+++ + + G+f++l+v n+++k+n++f+vPv+ aefav+r++++ Oeu020630.2 156 NTFALSATEVGSLISLGPKDSCEFFHDPSMLSSNAGQVRKSLSIKAHDNAGGYFISLNVVNNILKTNDRFVVPVTTAEFAVMRTAFN 242 57**********************************************************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 281 aa Download sequence
MLKLSKLLSH SRFYEVGKVS CSWLVLSSCS WNQLSQKRLF VEAVNHQWLR GMSTKASLST 60 AGQNFLPDGR SAAKIFAPYS IYKGKAALSA SPILPTFSKL ESGGIRVDRR GVIFLTFWPA 120 IGERKYDWDK KQDVAISRTF VTFACSSSTL SSCLENTFAL SATEVGSLIS LGPKDSCEFF 180 HDPSMLSSNA GQVRKSLSIK AHDNAGGYFI SLNVVNNILK TNDRFVVPVT TAEFAVMRTA 240 FNFALPHIMG WDRYTNQPPK SIDENPPRLA SEFMATEWNR *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G71260.1	1e-84	Whirly family protein