PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu019185.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 664aa MW: 74471.1 Da PI: 6.5902

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu019185.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	33.5	7.4e-11	463	510	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r+h Er+RR++iN++f L +l+P+ +K++K+++L +++e +++L+ Oeu019185.1 463 RNHVLSERKRREKINERFLILGSLVPSG-----GKVDKISVLDRTIERLRELE 510 579999******************98.....8***********999985 PP

Sequence ? help Back to Top
Protein Sequence Length: 664 aa Download sequence
MAVSLHQRST PNISRVAMEN QSQEEVPENL KKQLAIAVRS IEWSYAIFWS ISSEQPGVLK 60 WGDGYYNGDI KTRKTVQAEE LNSDQLGLQR SEQLRELYTS LSAGETNPQA KRPTAALSPE 120 DLTDAEWYYL VCMSFAFNVG QGLPGKTLAK NQTIWLCNAH QADTKVFIRS LLAKAKCINP 180 VCLLFDLQTV VCFPHLGGVV ELGATELVLK DKKLIQNIKT SFLEVPYPNV SKIPDQIPKN 240 VRNDNGLVYH RVNVPETSLN QLVEYPEVNI YSPNNGSNDF GAKQPDEELN IVEDIDGEAS 300 QMQSWQFMDD KISNCVNNSA NSSDCISQTC DNPEDIVPVS NEKKVIDNGM HDTQESGQQK 360 LNSSDSRGDD IHYHSVLSNL LKSSQQLILG PYFGNSNKES SFISWRKDRL SSSQIPQTHT 420 PQRLLKKVLI EVARMHENCQ LESSKGDGKR DGISKPEIDE IDRNHVLSER KRREKINERF 480 LILGSLVPSG GKVDKISVLD RTIERLRELE KRIEELESNS DVGMLESRTR IKPCDAIERT 540 SDNYGSKKSG NSKKPLTKKR KAYDKEEPRT DNGCSLLRDS LTDNITINVV DKDVLIEMKC 600 PWRESVLLEV MEATSKLHLD SQSVRSSNTD GILSLTIKAQ FKGSKTASTG LITQAIQKVI 660 RRC*

Sequence ? help Back to Top

Protein Sequence Length: 664 aa Download sequence

MAVSLHQRST PNISRVAMEN QSQEEVPENL KKQLAIAVRS IEWSYAIFWS ISSEQPGVLK  60
WGDGYYNGDI KTRKTVQAEE LNSDQLGLQR SEQLRELYTS LSAGETNPQA KRPTAALSPE  120
DLTDAEWYYL VCMSFAFNVG QGLPGKTLAK NQTIWLCNAH QADTKVFIRS LLAKAKCINP  180
VCLLFDLQTV VCFPHLGGVV ELGATELVLK DKKLIQNIKT SFLEVPYPNV SKIPDQIPKN  240
VRNDNGLVYH RVNVPETSLN QLVEYPEVNI YSPNNGSNDF GAKQPDEELN IVEDIDGEAS  300
QMQSWQFMDD KISNCVNNSA NSSDCISQTC DNPEDIVPVS NEKKVIDNGM HDTQESGQQK  360
LNSSDSRGDD IHYHSVLSNL LKSSQQLILG PYFGNSNKES SFISWRKDRL SSSQIPQTHT  420
PQRLLKKVLI EVARMHENCQ LESSKGDGKR DGISKPEIDE IDRNHVLSER KRREKINERF  480
LILGSLVPSG GKVDKISVLD RTIERLRELE KRIEELESNS DVGMLESRTR IKPCDAIERT  540
SDNYGSKKSG NSKKPLTKKR KAYDKEEPRT DNGCSLLRDS LTDNITINVV DKDVLIEMKC  600
PWRESVLLEV MEATSKLHLD SQSVRSSNTD GILSLTIKAQ FKGSKTASTG LITQAIQKVI  660
RRC*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	469	474	ERKRRE
2	470	475	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41315.1	1e-173	bHLH family protein