PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu019150.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 425aa MW: 47623.4 Da PI: 8.9931

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu019150.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18.7	4.9e-06	53	75	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C++C++ F r nL+ H r+H Oeu019150.1 53 YVCEICNQGFQRDQNLQMHRRRH 75 9*********************9 PP
2	zf-C2H2	15.5	4.9e-05	130	152	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C +C+k + +s++k H++t+ Oeu019150.1 130 WVCDKCSKGYAVQSDYKAHLKTC 152 58*******************98 PP
3	zf-C2H2	11	0.0013	160	178	5	23
TTTEEESSHHHHHHHHHHT CS zf-C2H2 5 dCgksFsrksnLkrHirtH 23 dCg++Fsr +++ H+ t+ Oeu019150.1 160 DCGRVFSRVESFIEHQDTC 178 9***************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 425 aa Download sequence
MLSSNNPSYS SEPFASSENE NSSKRKRRPA GTPDPDAEVV SLSPKTLLES DRYVCEICNQ 60 GFQRDQNLQM HRRRHKVPWK LLKRETPIAK KRVFVCPEPS CLHHDPCHAL GDLVGIKKHF 120 RRKHSNHKQW VCDKCSKGYA VQSDYKAHLK TCGTRGHSCD CGRVFSRVES FIEHQDTCSM 180 GRLRSESHNN LQPAACLSRT ASSPSPSSDT NVAPIFSAPL SLPNRKMENS FLNPSAGNSS 240 KNFKNSRPPN LELQLLTKMD ENQSTQLQLS IGSSEISEKT EMDNAYICSS EKQNMAVAAP 300 QSRRMKEQAD DQLRLAMAEK AYAEDARQQA KGQIELAEQE FANAKRIRQQ ARAELEKALA 360 LKQHAINQIN STTLQVTCQA CKQQFQASRT VTETLSPNGN SLGWSYISSG LREWDIKRGD 420 QTDN*

Sequence ? help Back to Top

Protein Sequence Length: 425 aa Download sequence

MLSSNNPSYS SEPFASSENE NSSKRKRRPA GTPDPDAEVV SLSPKTLLES DRYVCEICNQ  60
GFQRDQNLQM HRRRHKVPWK LLKRETPIAK KRVFVCPEPS CLHHDPCHAL GDLVGIKKHF  120
RRKHSNHKQW VCDKCSKGYA VQSDYKAHLK TCGTRGHSCD CGRVFSRVES FIEHQDTCSM  180
GRLRSESHNN LQPAACLSRT ASSPSPSSDT NVAPIFSAPL SLPNRKMENS FLNPSAGNSS  240
KNFKNSRPPN LELQLLTKMD ENQSTQLQLS IGSSEISEKT EMDNAYICSS EKQNMAVAAP  300
QSRRMKEQAD DQLRLAMAEK AYAEDARQQA KGQIELAEQE FANAKRIRQQ ARAELEKALA  360
LKQHAINQIN STTLQVTCQA CKQQFQASRT VTETLSPNGN SLGWSYISSG LREWDIKRGD  420
QTDN*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	24	29	KRKRRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01940.1	1e-139	C2H2 family protein