PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu019139.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 656aa MW: 72220.4 Da PI: 5.561 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 28.9 | 1.9e-09 | 2 | 26 | 32 | 56 |
HHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 32 eLAkklgLterqVkvWFqNrRakek 56 +L+++lgL rq+k+WFqNrR+++k Oeu019139.1 2 QLSRELGLAPRQIKFWFQNRRTQRK 26 8*********************998 PP | |||||||
2 | START | 164.6 | 7.1e-52 | 170 | 394 | 2 | 206 |
HHHHHHHHHHHHHHHC-TT-EEEE...EXCCTTEEEEEEESSS.......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEEC CS START 2 laeeaaqelvkkalaeepgWvkss...esengdevlqkfeeskv......dsgealrasgvvdmvlallveellddkeqWdetla....kaetlevis 86 +a a++el+++ + +ep+W+ks+ e +n + + ++f++ ++ + ea+r+sgvv+m lv ++d++ +W e ++ +a tlevis Oeu019139.1 170 IASNAMDELIRLLQTNEPLWMKSAdgrEVLNLENYERIFPSPNThrkcpnIRNEASRDSGVVIMSGLVLVDMFMDTS-KWMELFPtivsRAVTLEVIS 266 67899*******************99999999999999988888999999999*************99999999999.99999999999********* PP TT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--..-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSX CS START 87 sg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe.sssvvRaellpSgiliepksnghskvtwvehvdlkgrl 176 sg g+lqlm elq+lsplvp R f+R+++q ++g+w+ivd+S d +++ ++ ss++ a++lpSg+li++++ng+skvtwve+++ ++r Oeu019139.1 267 SGmlgsqtGTLQLMHEELQVLSPLVPtRQICFLRFCQQIEQGSWAIVDISYDLPNQESQfASSCI-ARRLPSGCLIQDMANGYSKVTWVENWEIEDRE 363 *********************************************************99655555.79****************************** PP X.HHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS START 177 p.hwllrslvksglaegaktwvatlqrqcek 206 p h l+r l+++gla+ga +w+++lqr ce+ Oeu019139.1 364 PiHRLYRDLIHRGLAFGAERWLSALQRICER 394 *****************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 656 aa Download sequence |
MQLSRELGLA PRQIKFWFQN RRTQRKAQYE RADNSALRAE NDKIRCENIT ISVALKNVIC 60 PSCGGPPVSE DPYLDEQRLQ MENVQLKEEL DKASSVAAKY IGRSISQLPP VQPFHVSSLD 120 LSMSSYGGLR IAGPSLDLDL LPGSLTGSLQ KLLFPTLSIS DMDKSLMADI ASNAMDELIR 180 LLQTNEPLWM KSADGREVLN LENYERIFPS PNTHRKCPNI RNEASRDSGV VIMSGLVLVD 240 MFMDTSKWME LFPTIVSRAV TLEVISSGML GSQTGTLQLM HEELQVLSPL VPTRQICFLR 300 FCQQIEQGSW AIVDISYDLP NQESQFASSC IARRLPSGCL IQDMANGYSK VTWVENWEIE 360 DREPIHRLYR DLIHRGLAFG AERWLSALQR ICERFSCLMV TSNSTLIPSP EGKRSMTKLA 420 QRMINNFCAS INPSNGERWM TLSGSNEFEV RAALHKSTDP GQPNAVVLSA ATTIWLPVSA 480 QNIFNFFRDE RTRPQWDVLS NQNPVQEVAH ISNGAHPGNC ISVLQALNAN QNMLILQESC 540 IDSSGSLVVY SPVDLPSINI AMSGADPSSI ALLPSGFTIS PDGRQQDQLQ AGGIDYGAST 600 STGGSSSGSL ITIVFQILVS SLPSAKMKQE SVTTVTNLIS DTARQIKAAL NCIAS* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G73360.1 | 0.0 | HD-ZIP family protein |