PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu018962.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB_related
Protein Properties Length: 336aa    MW: 37467.6 Da    PI: 10.1631
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu018962.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.41.6e-1369113147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      r +WT++E++++++a +++  + Wk+I + +g  +t  q++s+ qky
      Oeu018962.1  69 RESWTEQEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 113
                      789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MVSVCRNPVP GHDFYSYNYM DRNSTKMGLT AMNNAVNNLS IPAASGNAGP GVEDQNKKVR  60
KPYTITKSRE SWTEQEHDKF LEALQLFDRD WKKIEAFVGS KTVIQIRSHA QKYFLKVQKN  120
GTSERVPPPR PKKKAAHPYP QKAPKKVTGA LRSSAAMLET GYVVRPDSLS APGNAISGAA  180
LSPWTCKVPP AGNVSHMSRD DMRTANFTVT HNYSSSSNES TTRLWPKNES NPQVKEKQNP  240
PTKVMPDFAE VYRFIGSVFD PNASDHMERL KKMDRINVET AVMLMKNLSA NLMSPEFEDH  300
RRMFSSYGVG IEKDNFDSPL KNLQVDKVGK AIPTA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.16e-82MYB_related family protein