PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu018721.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family Trihelix
Protein Properties Length: 529aa    MW: 59974.8 Da    PI: 7.7403
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu018721.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix96.42.6e-3099184187
     trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                  rW++qe+laL+e+r++++ ++++g++k+plW+evs+ m +e+g++rs k+C+ek+enl k+y+k+keg+ +r  ++ +++++f+qlea
  Oeu018721.1  99 RWPRQETLALLEIRSRLDPKFKEGNQKGPLWDEVSRIMaEEHGYQRSGKKCREKFENLYKYYRKTKEGKAGR--QDGKHYRFFRQLEA 184
                  8*************************************999*****************************98..55667*******85 PP
2trihelix476.6e-15387461279
     trihelix   2 WtkqevlaLiearremeerlrrgk.lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstc 79 
                  W++ e+  Li++r ++e+r+++g  +++ lWe ++ km+  g+ rs+  Ckekw+ +n++  k+++ +k++ ++    +
  Oeu018721.1 387 WPECEISRLIQLRISLESRFQQGGfSEEVLWEGIATKMACFGYDRSALVCKEKWDGVNNYVIKCNKKRKENPKP----Y 461
                  *********************9754889*************************************999986333....3 PP
Sequence ? help Back to Top
Protein Sequence    Length: 529 aa     Download sequence    
MDDETGMADL RQYVNRRSFF PPIPPGTDLL SDHHPGLTQL QQYDMFMIPH GLQPAFRSDS  60
TTSNTGGGGG GSSISAGGFG GFETEAGGLN GCGDGGTGRW PRQETLALLE IRSRLDPKFK  120
EGNQKGPLWD EVSRIMAEEH GYQRSGKKCR EKFENLYKYY RKTKEGKAGR QDGKHYRFFR  180
QLEALYGGIN NTVPVSEAHP AGRTFLNSSS TNNILTPNQQ EVYQAPKLSD TSLSLSNSSD  240
FDTTSSDGGD FNGRRNDDSS GNRQKKRGNR RWKGKIKDFI DSHMRKLMDK QESWMEKMMR  300
KIEDKEQERI IREDEWRKQD ADRIEKERKF WTSERAYIEA RHAALMEAIR NVAGKGLKAS  360
LSDELMAVET RSLSENQNDD EKGDMIWPEC EISRLIQLRI SLESRFQQGG FSEEVLWEGI  420
ATKMACFGYD RSALVCKEKW DGVNNYVIKC NKKRKENPKP YSYYCQNNMS ICNNHGGAFF  480
DNTSGLGPEV SPSNSNTGNA MNDSCFRYFM GDDHNMWENF GLKLNKLG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03680.11e-118Trihelix family protein