PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu018439.2

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

CPP

Protein Properties

Length: 587aa MW: 63500.3 Da PI: 7.3782

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu018439.2	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	25.1	3.6e-08	204	228	16	41
TCR 16 kYCeCfaagkkCseeCkCedCkNkee 41 +YCeCfa+g++C+ C+C +C+N+ e Oeu018439.2 204 RYCECFASGVYCDG-CNCVNCHNNIE 228 6***********.******976 PP
2	TCR	51	2.9e-16	274	313	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 k++kgC+Ckks ClkkYCeCf+a+ Cse+CkC dCkN e Oeu018439.2 274 KHNKGCHCKKSGCLKKYCECFQANILCSENCKCLDCKNYE 313 589***********************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 587 aa Download sequence
MEQSEGGDFL PKGPQHSQAT PAAAADFPVR NPARQLDFTG SGDGASSSVG LALAEVSQPQ 60 QSQTPSHLIQ QQHPQLVKPK NQPPKPPPLP QIPLLTMQPA VPSSHPSVRP ALKPESPRVR 120 SRQNLAEVKD GTPKKPKQCN CKHSRCLKFE GYSLSNSQYG SKGGEVMDSS NGLNSNAIQH 180 VCINCKLVFL VGVFFMTYNL LMVRYCECFA SGVYCDGCNC VNCHNNIEND EARREAVEAT 240 LERNPQAFRP KIASSPHGAR DLREETGEGV VLAKHNKGCH CKKSGCLKKY CECFQANILC 300 SENCKCLDCK NYEGSEERQA LFHGDHAHDM AYIQQAANAA ITGAVGSSGY GSPPVNKKRK 360 GQDLFFGSTV KDPVHKIRQF QQADQINASL PSSSLPSIPG AFAGNALTLG PSKFTYRSLL 420 AGIIQPQDLK ELCSVLVYSG EAAKILADER KAAEKQAENS RETLAASSAQ DQCQSPKNAG 480 ADKPLIDDLS SRNQADTNSE EYTSNGAGDS KERPMSPSTL ALMCDEQDTI FTPAASSNEL 540 SGHSSVTTQL LNRQDLSETY AEQERIVLTK FRDCLNRLIT LGEIKG*

Sequence ? help Back to Top

Protein Sequence Length: 587 aa Download sequence

MEQSEGGDFL PKGPQHSQAT PAAAADFPVR NPARQLDFTG SGDGASSSVG LALAEVSQPQ  60
QSQTPSHLIQ QQHPQLVKPK NQPPKPPPLP QIPLLTMQPA VPSSHPSVRP ALKPESPRVR  120
SRQNLAEVKD GTPKKPKQCN CKHSRCLKFE GYSLSNSQYG SKGGEVMDSS NGLNSNAIQH  180
VCINCKLVFL VGVFFMTYNL LMVRYCECFA SGVYCDGCNC VNCHNNIEND EARREAVEAT  240
LERNPQAFRP KIASSPHGAR DLREETGEGV VLAKHNKGCH CKKSGCLKKY CECFQANILC  300
SENCKCLDCK NYEGSEERQA LFHGDHAHDM AYIQQAANAA ITGAVGSSGY GSPPVNKKRK  360
GQDLFFGSTV KDPVHKIRQF QQADQINASL PSSSLPSIPG AFAGNALTLG PSKFTYRSLL  420
AGIIQPQDLK ELCSVLVYSG EAAKILADER KAAEKQAENS RETLAASSAQ DQCQSPKNAG  480
ADKPLIDDLS SRNQADTNSE EYTSNGAGDS KERPMSPSTL ALMCDEQDTI FTPAASSNEL  540
SGHSSVTTQL LNRQDLSETY AEQERIVLTK FRDCLNRLIT LGEIKG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	1e-161	CPP family protein