PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu018222.2

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 383aa MW: 42938.6 Da PI: 5.0968

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu018222.2	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.2	2.6e-12	187	238	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ + Lr+l+P + + ++ + a+i A+e++++L+ Oeu018222.2 187 QRMTHIAVERNRRKQMNEHLRVLRSLMPGS---YVQRGDQASIIGGAIEFVRELE 238 79**************************...9***************9995 PP

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence
MMEKEGNYLA TGNSDYSIEN HQQQQMMTPQ IGETSADSSC QMVDYMFNNP SLQSSNYCGS 60 TSLDKLSFAD VMQLADFGPK LALNQARTSA DQETTGGIDP VYFLKFPVLN EKLQDDQSLL 120 AVPQALGEDQ ERNGKAVEEG GEDMVENTSA QLRFLGKNLE KSPVTESGKN KRKRPRTTKT 180 NEEVESQRMT HIAVERNRRK QMNEHLRVLR SLMPGSYVQR GDQASIIGGA IEFVRELEQL 240 LQCLESQKRR RLYGDGQRPI VDPSIVVQQQ QQQPQPPFLI PPVPNPLNDQ VKLVEYETGL 300 REETAESKSC LADVEVKVLG FDALIKILSR RRPGQLIKAV AALEDLQLNI LHTNITTIEQ 360 TVLYSFNVKV GILSMSTYED KK*

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence

MMEKEGNYLA TGNSDYSIEN HQQQQMMTPQ IGETSADSSC QMVDYMFNNP SLQSSNYCGS  60
TSLDKLSFAD VMQLADFGPK LALNQARTSA DQETTGGIDP VYFLKFPVLN EKLQDDQSLL  120
AVPQALGEDQ ERNGKAVEEG GEDMVENTSA QLRFLGKNLE KSPVTESGKN KRKRPRTTKT  180
NEEVESQRMT HIAVERNRRK QMNEHLRVLR SLMPGSYVQR GDQASIIGGA IEFVRELEQL  240
LQCLESQKRR RLYGDGQRPI VDPSIVVQQQ QQQPQPPFLI PPVPNPLNDQ VKLVEYETGL  300
REETAESKSC LADVEVKVLG FDALIKILSR RRPGQLIKAV AALEDLQLNI LHTNITTIEQ  360
TVLYSFNVKV GILSMSTYED KK*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	188	199	RMTHIAVERNRR
2	248	252	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24140.1	1e-111	bHLH family protein