PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu017949.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 281aa MW: 31011.4 Da PI: 8.2183

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu017949.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.6	0.00043	218	240	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +Cp C+ +Fs+ L+ H + H Oeu017949.1 218 QCPQCNLRFSTVGALVDHVEKvH 240 7*****************99888 PP
2	zf-C2H2	17	1.7e-05	252	274	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +Cp+C+k F+++ L+ H + H Oeu017949.1 252 VCPKCSKGFRDPVALVEHVEKeH 274 7*****************99888 PP

Sequence ? help Back to Top
Protein Sequence Length: 281 aa Download sequence
MGTPAFPNLG KHCSVEVCRQ IDFLPFTCDC CHQVFCLEHR SYGRHLCPKA NKHDVTVVIC 60 PLCAKGVRLI PDEDPNITWE SHVNIECDPS NYEKATKKRK CPVPRCRELL TFSNTVKCKD 120 CGVDHCLKHR FGQEHNCPGP KKPEAAFQFM GFLNRSRKEE PKQAAFSSSS KWATSFLKAA 180 EAGMARLSSE FNQVLGRDGE GQSSSSSRGG SASGQFEQCP QCNLRFSTVG ALVDHVEKVH 240 ERNGVMKVTV DVCPKCSKGF RDPVALVEHV EKEHGGVSKA *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41835.1	1e-118	C2H2 family protein