PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu017875.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 434aa MW: 48608.6 Da PI: 6.4487

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu017875.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	19.8	2.2e-06	197	218	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C +Cgk F+r nL+ H+r H Oeu017875.1 197 FCMICGKGFKRDANLRMHMRGH 218 5*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 434 aa Download sequence
MRIEQKISDF NPAAEIQSSL ACDFNNQTGI TSQKDYQMNV AQESNRIQDW DPRNTLSSLS 60 FLEKKIHQLR DLIQLITGQR GQFRGESDKL LFQQQMLITA DLTSIIVQVM STAGSLLPSV 120 DCSHVANPSA GVSQNVVLPE NFSLNKVEDL SGNENCAVED HELKSDDDPD EGENLPPGSY 180 EILQLEKDEI LALHTHFCMI CGKGFKRDAN LRMHMRGHGD EYKSSAALAK PNKESGFESI 240 LVKRYSCPFV GCKRNKDHKR FQPLKTILCM KNHYRRTHCD KTYMCSQCNV KKFSVIADLK 300 THEKHCGKDK WLCSCGTTFS RKDKLFGHIT LFQGHTPAIP VDDAKTSTVT SDQGQISEKT 360 TKIESSDFNF KSNVMEVKGS GNDPISCFSP LDFGESNAGE FHEFPQPPFE DSESSFSFLF 420 SGSCDYPSKT GRY*

Sequence ? help Back to Top

Protein Sequence Length: 434 aa Download sequence

MRIEQKISDF NPAAEIQSSL ACDFNNQTGI TSQKDYQMNV AQESNRIQDW DPRNTLSSLS  60
FLEKKIHQLR DLIQLITGQR GQFRGESDKL LFQQQMLITA DLTSIIVQVM STAGSLLPSV  120
DCSHVANPSA GVSQNVVLPE NFSLNKVEDL SGNENCAVED HELKSDDDPD EGENLPPGSY  180
EILQLEKDEI LALHTHFCMI CGKGFKRDAN LRMHMRGHGD EYKSSAALAK PNKESGFESI  240
LVKRYSCPFV GCKRNKDHKR FQPLKTILCM KNHYRRTHCD KTYMCSQCNV KKFSVIADLK  300
THEKHCGKDK WLCSCGTTFS RKDKLFGHIT LFQGHTPAIP VDDAKTSTVT SDQGQISEKT  360
TKIESSDFNF KSNVMEVKGS GNDPISCFSP LDFGESNAGE FHEFPQPPFE DSESSFSFLF  420
SGSCDYPSKT GRY*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34370.2	1e-161	C2H2 family protein