PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Oeu017655.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
|
||||||||
Family | GATA | ||||||||
Protein Properties | Length: 145aa MW: 16030.8 Da PI: 10.6 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 61.2 | 1.3e-19 | 38 | 72 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 Cs+C+ttkTplWR gp+g+k+LCnaCG++y kk++ Oeu017655.1 38 CSSCHTTKTPLWRGGPSGPKSLCNACGIKYNKKRR 72 ********************************986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 145 aa Download sequence |
MILIMIFDQI LNANSNLVFV SQTLDAEEKN PSTQIKTCSS CHTTKTPLWR GGPSGPKSLC 60 NACGIKYNKK RRQHLGLETA RTGKKKKRSN INKSNEIKEI LKMRFMALGS EVMLQRTGKL 120 MSKLREEEQA AILLMSLSCG SVSA* |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 69 | 88 | KKRRQHLGLETARTGKKKKR |
2 | 70 | 89 | KKRRQHLGLETARTGKKKKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G06740.1 | 2e-28 | GATA family protein |