PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu016980.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | TCP | ||||||||
Protein Properties | Length: 201aa MW: 21622.8 Da PI: 9.881 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 112.4 | 6.4e-35 | 50 | 117 | 6 | 73 |
TCP 6 drhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec 73 +++++hTkv+gR+RRvR++a+caar+F+L++eLG+ + ++tieWLl+qa+pai+++tgt++ +a + Oeu016980.1 50 LSTKDRHTKVNGRGRRVRIPALCAARVFQLTRELGHRSEGETIEWLLRQAEPAIIAATGTGTVPADKI 117 689*********************************************************77777333 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 201 aa Download sequence |
MPVQPSRHHL VQPLRAVIPH PATAAAVESS AAKPAKTKLG LSKTANGSPL STKDRHTKVN 60 GRGRRVRIPA LCAARVFQLT RELGHRSEGE TIEWLLRQAE PAIIAATGTG TVPADKISTA 120 PTIPLSRSPA SVQAPVNRSL QPMLPPSCRL DLCQASPPPM GLEFDPNAYR HMPFTALLLQ 180 PAAEEEEEAE ERHRGVVEDR * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37000.1 | 4e-45 | TCP family protein |