PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu016966.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

ARF

Protein Properties

Length: 691aa MW: 76373.6 Da PI: 7.449

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu016966.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	74.1	1.6e-23	121	222	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f k+lt+sd+++ g +++p+ +ae++ + ++ + t+ +d +g++W++++iyr++++r++lt+GW+ Fv+ ++L +gD+vvF + +++ Oeu016966.1 121 FAKTLTQSDANNGGGFSVPRYCAETIfprldysSDPPVQ--TVLAKDVHGETWKFRHIYRGTPRRHLLTTGWSTFVNHKKLVAGDSVVFL--RAENGD 214 89**************************995444444..8999*****************************************..448888 PP .EEEEE-S CS B3 92 lvvkvfrk 99 l+++++r+ Oeu016966.1 215 LCIGIRRA 222 9**996 PP
2	Auxin_resp	115.9	3.6e-38	287	370	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 aa+ as++++FevvY+Pr++tseF+vk++ v++al+++++ GmRfkmafetedss++++ +Gt+++v+ +dp+rWp+S+Wr+L+ Oeu016966.1 287 AATLASSGQPFEVVYYPRSGTSEFCVKASIVKTALQIRWCSGMRFKMAFETEDSSRISWfMGTISSVQVVDPIRWPDSPWRLLQ 370 68899*****************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 691 aa Download sequence
MITFIESKEK TKENEKCLDS QLWHACAGSM VQMPPMNSNV FYFPQGHAEH ASGNVDFRSC 60 PRVPPYIPCR VSAIKFMADP ETDEVFTKMR LVPVNGNEAD FDESGVVGMN GSDNPDKPSS 120 FAKTLTQSDA NNGGGFSVPR YCAETIFPRL DYSSDPPVQT VLAKDVHGET WKFRHIYRGT 180 PRRHLLTTGW STFVNHKKLV AGDSVVFLRA ENGDLCIGIR RAKRGIDGGL ETPSLWNPAG 240 GSCFVPYGGF SDFLREDENR LTRNGSGNSG RNLIGLGRVK PESVIEAATL ASSGQPFEVV 300 YYPRSGTSEF CVKASIVKTA LQIRWCSGMR FKMAFETEDS SRISWFMGTI SSVQVVDPIR 360 WPDSPWRLLQ VIWDEPDLLQ NVKHVSPWLV ELVSNMPTMH LSPISPPRKK LRLTQHPDFH 420 LDGQLPLSAF SSNHVLGSSN PFGCLLDNTP ARMQGARHAQ YGLSISDHHL SKLQSGLFPI 480 GFMPLNRASV HTGTSNLVIP KPSNNENVSR TVSMGNSNHV SIRNNNKKAG QFVLFGRPIL 540 TEQQISLSGS GNAVSPIRTG NISLDENADK MGNTSDKPSS PLNQHDAPKH SLCKGFHSEL 600 NSETGHCKVF MESEDVGRTL DISLLSSYEE LCKKLENMFD IEISEMLTHV VYWDVMGAVQ 660 KLGDKPFSEF MKTAIRLKIL TDSSCNNIGM *

Sequence ? help Back to Top

Protein Sequence Length: 691 aa Download sequence

MITFIESKEK TKENEKCLDS QLWHACAGSM VQMPPMNSNV FYFPQGHAEH ASGNVDFRSC  60
PRVPPYIPCR VSAIKFMADP ETDEVFTKMR LVPVNGNEAD FDESGVVGMN GSDNPDKPSS  120
FAKTLTQSDA NNGGGFSVPR YCAETIFPRL DYSSDPPVQT VLAKDVHGET WKFRHIYRGT  180
PRRHLLTTGW STFVNHKKLV AGDSVVFLRA ENGDLCIGIR RAKRGIDGGL ETPSLWNPAG  240
GSCFVPYGGF SDFLREDENR LTRNGSGNSG RNLIGLGRVK PESVIEAATL ASSGQPFEVV  300
YYPRSGTSEF CVKASIVKTA LQIRWCSGMR FKMAFETEDS SRISWFMGTI SSVQVVDPIR  360
WPDSPWRLLQ VIWDEPDLLQ NVKHVSPWLV ELVSNMPTMH LSPISPPRKK LRLTQHPDFH  420
LDGQLPLSAF SSNHVLGSSN PFGCLLDNTP ARMQGARHAQ YGLSISDHHL SKLQSGLFPI  480
GFMPLNRASV HTGTSNLVIP KPSNNENVSR TVSMGNSNHV SIRNNNKKAG QFVLFGRPIL  540
TEQQISLSGS GNAVSPIRTG NISLDENADK MGNTSDKPSS PLNQHDAPKH SLCKGFHSEL  600
NSETGHCKVF MESEDVGRTL DISLLSSYEE LCKKLENMFD IEISEMLTHV VYWDVMGAVQ  660
KLGDKPFSEF MKTAIRLKIL TDSSCNNIGM *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30080.1	0.0	ARF family protein