PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu016681.2
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family NF-YA
Protein Properties Length: 349aa    MW: 38852.9 Da    PI: 9.268
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu016681.2genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA103.61.8e-32206262158
    CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                  +ep+YVNaKQy++Il+RRq+Rak+e ekkl +k+rkpylheSRh+hAlrR+RgsgGrF
  Oeu016681.2 206 QEPVYVNAKQYHGILRRRQSRAKAELEKKL-IKARKPYLHESRHQHALRRARGSGGRF 262
                  69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    
MQSKTPSVTQ GDSHLYNVSE SLVHAQPWCN ITGSFNTSIM RHNYSDLSSM DQSMDSQSQS  60
EGGINEEDNV IKQSEGTICE TPDRNYGQVD QIFQQDSAAI RRSGDKQPPQ PELVGHSIAC  120
AMNPYDPYGG MMAAYSQPSG TLHEAQKWTL VLEGVIFARL LLDTLAIKLI AQIGLKRVKK  180
ALKKTIVPII YDVHHTRMML PMEMAQEPVY VNAKQYHGIL RRRQSRAKAE LEKKLIKARK  240
PYLHESRHQH ALRRARGSGG RFAKKSDADT SKETRSGSAI STQSLTSTSS ETLPSESSEM  300
KVLKAELSCN NDISSVRKQI NLSDAREEGC TSNQQWRNIV SNRSLAMQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12840.21e-30NF-YA family protein