PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu016535.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 126aa    MW: 14883.9 Da    PI: 10.1669
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu016535.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS38.31.9e-12774174242
         GRAS 174 vpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvv 242
                   +f+f + +a++++++++e+L v+++E++ V++ ++  +lld+ v  +s+r+ vL+l+k++sP v+v+ 
  Oeu016535.1   7 FHFRFYA-IAQKWKTIKIEDLMVNKDEVVLVSCLYRFRNLLDKIVVADSPRNIVLNLIKKISPIVFVLG 74 
                  4566666.799*******************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 126 aa     Download sequence    
MLRLLTFHFR FYAIAQKWKT IKIEDLMVNK DEVVLVSCLY RFRNLLDKIV VADSPRNIVL  60
NLIKKISPIV FVLGTVRIVC KHHTVIHPIL PFQSISFKLE LLDIDTLFVF KFIFNYTFHS  120
IHNFY*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.11e-20GRAS family protein