PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu016528.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB_related

Protein Properties

Length: 700aa MW: 78275 Da PI: 8.947

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu016528.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	21.5	5.6e-07	592	641	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 r +++ E e lv+av++lG+g+W+ + + +Rt ++k++w ++ Oeu016528.1 592 RRPFSVTEVEALVEAVEKLGTGRWRNVKMRAFedaDHRTYVDLKDKWKTL 641 678999******************97666679***********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 700 aa Download sequence
MVSKKRQDYG FSGYRVPVIP RAPRSIRRRS PRKKLVEDST ISAFELLAAV AGKLLQESES 60 STSSNVAEVK VHPGFCRDGK KMRLPENDKA LKLKYFDQGS CAESAFFPEI SVQDRNILSN 120 VKELPQAEND SILDHTSALV SCDLATRVDY DMKLEMCTDK SPNGTFPRKV DGGSNDVGDI 180 YDPKMDNGPE KQLVNEQEQV GDLTMANESS VKDPFEECVN NNVLINSESS VQLSLYRDSI 240 PGALFQNHRN DVKLGIIDDD ENSFGCNKPC TKIRPFRLQL CNGYHRTRKM LTSKYRKVAP 300 KIKDREFYNS NEGMKFFYRC RKNICKRERC HWVPIKKRKL FDHSFEVAYD QEASSESVYN 360 LPEKKMRGDN SSSASIFHKE SGFSASVKAR QKSKDSKVKF SIKSFRVPEL YIEVPETATV 420 GSLKRMVMEA VTAILGSGLQ VGVVLQGKKV RDDNRTLQQA GISQSSNLDS LGFALEPSFA 480 HVSGQRAPKD LPLVLQCDAA LLSSRSTASP IFDSGISNAA LDPPLVMKLD NDIGNNQELI 540 PSPKTTIDSL IDGVLPDSKA LIPVPPTNIE ALAVVPFNSK CKHTEISQRR TRRPFSVTEV 600 EALVEAVEKL GTGRWRNVKM RAFEDADHRT YVDLKDKWKT LVHTASIAPQ QRRGEPVPQE 660 MLDRVLAAHA YWSQHQTKHG KHQVEPLQII DSPREIVGA*

Sequence ? help Back to Top

Protein Sequence Length: 700 aa Download sequence

MVSKKRQDYG FSGYRVPVIP RAPRSIRRRS PRKKLVEDST ISAFELLAAV AGKLLQESES  60
STSSNVAEVK VHPGFCRDGK KMRLPENDKA LKLKYFDQGS CAESAFFPEI SVQDRNILSN  120
VKELPQAEND SILDHTSALV SCDLATRVDY DMKLEMCTDK SPNGTFPRKV DGGSNDVGDI  180
YDPKMDNGPE KQLVNEQEQV GDLTMANESS VKDPFEECVN NNVLINSESS VQLSLYRDSI  240
PGALFQNHRN DVKLGIIDDD ENSFGCNKPC TKIRPFRLQL CNGYHRTRKM LTSKYRKVAP  300
KIKDREFYNS NEGMKFFYRC RKNICKRERC HWVPIKKRKL FDHSFEVAYD QEASSESVYN  360
LPEKKMRGDN SSSASIFHKE SGFSASVKAR QKSKDSKVKF SIKSFRVPEL YIEVPETATV  420
GSLKRMVMEA VTAILGSGLQ VGVVLQGKKV RDDNRTLQQA GISQSSNLDS LGFALEPSFA  480
HVSGQRAPKD LPLVLQCDAA LLSSRSTASP IFDSGISNAA LDPPLVMKLD NDIGNNQELI  540
PSPKTTIDSL IDGVLPDSKA LIPVPPTNIE ALAVVPFNSK CKHTEISQRR TRRPFSVTEV  600
EALVEAVEKL GTGRWRNVKM RAFEDADHRT YVDLKDKWKT LVHTASIAPQ QRRGEPVPQE  660
MLDRVLAAHA YWSQHQTKHG KHQVEPLQII DSPREIVGA*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07540.1	1e-91	MYB_related family protein