PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu016221.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB_related
Protein Properties Length: 390aa    MW: 44173.4 Da    PI: 4.4694
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu016221.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding21.74.8e-07246293347
                      SS-HHHHHHHHHHHH....HTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavk....qlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE++++ +++     +lG++ W+  ++ ++ +Rt k+++s+++++
      Oeu016221.1 246 KWTEEEQQIFHQVIYsnplLLGKNFWRHLSAVFP-TRTKKEIVSYYFNV 293
                      8*************7333367888**********.***********996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 390 aa     Download sequence    
MGTKRPFQED DFPELSFKHA KQLGFNNNLN SYFEDFSSCR TSAKSDTVGV AASNFCNYKF  60
DERHGNSDIS SYSNIDEKEL EMGTALSNGS IDEDSAFEDR FCWSHFQGYF DFSVPRRLPV  120
QFRDPYSFLL NCSPRKEIPV GRDHQAEVPP WDPNATWKDT SSPSYFVDDE SEEKLMGTCI  180
IPMPNLKFDG IKEVHGQADC NCLDRGSVKC VQQHAKEARE KLRETIGDEK FAELGFLDMG  240
EEVASKWTEE EQQIFHQVIY SNPLLLGKNF WRHLSAVFPT RTKKEIVSYY FNVFMLRRRA  300
LQNRINPLAV NSDDDEWHGA DGGFYQGGEE DEDSLVESFG DQDVHVGPGN GSSSENVCRY  360
EVEDSGNGIF HGNGNGEHGD AIELDSKRD*